2rff: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2rff.gif|left|200px]]<br /><applet load="2rff" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2rff, resolution 1.400&Aring;" />
-'''Crystal structure of a putative nucleotidyltransferase (NP_343093.1) from Sulfolobus solfataricus at 1.40 A resolution'''<br />
-==About this Structure==
+==Crystal structure of a putative nucleotidyltransferase (NP_343093.1) from Sulfolobus solfataricus at 1.40 A resolution==
-RFF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2] with <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFF OCA].
+<StructureSection load='2rff' size='340' side='right'caption='[[2rff]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Sulfolobus solfataricus p2]]
+<table><tr><td colspan='2'>[[2rff]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RFF FirstGlance]. <br>
-[[Category: JCSG, Joint Center for Structural Genomics.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-[[Category: EDO]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: a putative nucleotidyltransferase]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rff OCA], [https://pdbe.org/2rff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rff RCSB], [https://www.ebi.ac.uk/pdbsum/2rff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rff ProSAT], [https://www.topsan.org/Proteins/JCSG/2rff TOPSAN]</span></td></tr>
-[[Category: jcsg]]
+</table>
-[[Category: joint center for structural genomics]]
+== Function ==
-[[Category: np_343093 1]]
+[https://www.uniprot.org/uniprot/Q97XP0_SACS2 Q97XP0_SACS2]
-[[Category: nucleotidyltransferase domain]]
+== Evolutionary Conservation ==
-[[Category: protein structure initiative]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: psi-2]]
+Check<jmol>
-[[Category: structural genomics]]
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/2rff_consurf.spt"</scriptWhenChecked>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:46:52 2008''
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rff ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Saccharolobus solfataricus P2]]