2rfl: Difference between revisions

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-{{Seed}}
-[[Image:2rfl.png|left|200px]]
-<!--
+==Crystal structure of the putative phosphohistidine phosphatase SixA from Agrobacterium tumefaciens==
-The line below this paragraph, containing "STRUCTURE_2rfl", creates the "Structure Box" on the page.
+<StructureSection load='2rfl' size='340' side='right'caption='[[2rfl]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2rfl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RFL FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
-{{STRUCTURE_2rfl|  PDB=2rfl  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rfl OCA], [https://pdbe.org/2rfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rfl RCSB], [https://www.ebi.ac.uk/pdbsum/2rfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rfl ProSAT], [https://www.topsan.org/Proteins/MCSG/2rfl TOPSAN]</span></td></tr>
+</table>
-===Crystal structure of the putative phosphohistidine phosphatase SixA from Agrobacterium tumefaciens===
+== Function ==
+[https://www.uniprot.org/uniprot/A9CJ67_AGRFC A9CJ67_AGRFC]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-RFL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFL OCA].
+Check<jmol>
-[[Category: Agrobacterium tumefaciens str. c58]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/2rfl_consurf.spt"</scriptWhenChecked>
-[[Category: Binkowski, T.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Edwards, A M.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Joachimiak, A.]]
+  </jmolCheckbox>
-[[Category: Kim, Y.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rfl ConSurf].
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+<div style="clear:both"></div>
-[[Category: Savchenko, A.]]
+__TOC__
-[[Category: Xu, X.]]
+</StructureSection>
-[[Category: Alpha-beta-alpha sandwich]]
+[[Category: Agrobacterium fabrum str. C58]]
-[[Category: Hydrolase]]
+[[Category: Large Structures]]
-[[Category: Isomerase]]
+[[Category: Binkowski T]]
-[[Category: Mcsg]]
+[[Category: Edwards AM]]
-[[Category: Midwest center for structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: Protein structure initiative]]
+[[Category: Kim Y]]
-[[Category: Psi-2]]
+[[Category: Savchenko A]]
-[[Category: Structural genomic]]
+[[Category: Xu X]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:31:22 2008''