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==Crystal structure of the PAS domain of nitrogen regulation protein NR(II) from Vibrio parahaemolyticus==
==Crystal structure of the PAS domain of nitrogen regulation protein NR(II) from Vibrio parahaemolyticus==
<StructureSection load='3b33' size='340' side='right' caption='[[3b33]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
<StructureSection load='3b33' size='340' side='right'caption='[[3b33]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3b33]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B33 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3B33 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3b33]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B33 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B33 FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP0119 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidine_kinase Histidine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.13.3 2.7.13.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b33 OCA], [https://pdbe.org/3b33 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b33 RCSB], [https://www.ebi.ac.uk/pdbsum/3b33 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b33 ProSAT], [https://www.topsan.org/Proteins/MCSG/3b33 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3b33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b33 OCA], [http://pdbe.org/3b33 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3b33 RCSB], [http://www.ebi.ac.uk/pdbsum/3b33 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3b33 ProSAT], [http://www.topsan.org/Proteins/MCSG/3b33 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q87TF0_VIBPA Q87TF0_VIBPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b3/3b33_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b3/3b33_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Histidine kinase]]
[[Category: Large Structures]]
[[Category: Vibpa]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: Abdullah, J]]
[[Category: Abdullah J]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J]]
[[Category: Sather A]]
[[Category: Sather, A]]
[[Category: Apc91440 4]]
[[Category: Kinase]]
[[Category: Mcsg]]
[[Category: Nitrogen regulation protein]]
[[Category: Pas domain]]
[[Category: Phosphorylation]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transferase]]

Latest revision as of 11:46, 30 October 2024

Crystal structure of the PAS domain of nitrogen regulation protein NR(II) from Vibrio parahaemolyticusCrystal structure of the PAS domain of nitrogen regulation protein NR(II) from Vibrio parahaemolyticus

Structural highlights

3b33 is a 1 chain structure with sequence from Vibrio parahaemolyticus RIMD 2210633. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.83Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q87TF0_VIBPA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3b33, resolution 1.83Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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