2yzi: Difference between revisions

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==Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii==
==Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii==
<StructureSection load='2yzi' size='340' side='right' caption='[[2yzi]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
<StructureSection load='2yzi' size='340' side='right'caption='[[2yzi]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2yzi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZI FirstGlance]. <br>
<table><tr><td colspan='2'>[[2yzi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZI FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzi OCA], [http://pdbe.org/2yzi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yzi RCSB], [http://www.ebi.ac.uk/pdbsum/2yzi PDBsum], [http://www.topsan.org/Proteins/RSGI/2yzi TOPSAN]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzi OCA], [https://pdbe.org/2yzi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzi RCSB], [https://www.ebi.ac.uk/pdbsum/2yzi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzi ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzi TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O57847_PYRHO O57847_PYRHO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzi_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzi_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Pyrococcus shinkaii]]
[[Category: Large Structures]]
[[Category: Kanagawa, M]]
[[Category: Pyrococcus horikoshii]]
[[Category: Kuramitsu, S]]
[[Category: Kanagawa M]]
[[Category: Structural genomic]]
[[Category: Kuramitsu S]]
[[Category: Yokoyama, S]]
[[Category: Yokoyama S]]
[[Category: Hypothetical protein]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Rsgi]]
[[Category: Sheet/helix/sheet/sheet/helix]]
[[Category: Unknown function]]

Latest revision as of 04:32, 21 November 2024

Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshiiCrystal structure of uncharacterized conserved protein from Pyrococcus horikoshii

Structural highlights

2yzi is a 2 chain structure with sequence from Pyrococcus horikoshii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.25Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O57847_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2yzi, resolution 2.25Å

Drag the structure with the mouse to rotate

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OCA