2yzi: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
m Protected "2yzi" [edit=sysop:move=sysop]
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2yzi.png|left|200px]]


{{STRUCTURE_2yzi|  PDB=2yzi  |  SCENE=  }}
==Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii==
 
<StructureSection load='2yzi' size='340' side='right'caption='[[2yzi]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
===Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2yzi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZI FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2yzi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZI OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzi OCA], [https://pdbe.org/2yzi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzi RCSB], [https://www.ebi.ac.uk/pdbsum/2yzi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzi ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzi TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O57847_PYRHO O57847_PYRHO]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzi_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzi ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
[[Category: Kanagawa, M.]]
[[Category: Kanagawa M]]
[[Category: Kuramitsu, S.]]
[[Category: Kuramitsu S]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Hypothetical protein]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Sheet/helix/sheet/sheet/helix]]
[[Category: Structural genomic]]
[[Category: Unknown function]]

Latest revision as of 04:32, 21 November 2024

Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshiiCrystal structure of uncharacterized conserved protein from Pyrococcus horikoshii

Structural highlights

2yzi is a 2 chain structure with sequence from Pyrococcus horikoshii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.25Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O57847_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2yzi, resolution 2.25Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA