2zbv: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2zbv.jpg|left|200px]]<br /><applet load="2zbv" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2zbv, resolution 2.05&Aring;" />
-'''Crystal structure of uncharacterized conserved protein from Thermotoga maritima'''<br />
-==About this Structure==
+==Crystal structure of uncharacterized conserved protein from Thermotoga maritima==
-ZBV is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with <scene name='pdbligand=ADN:'>ADN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZBV OCA].
+<StructureSection load='2zbv' size='340' side='right'caption='[[2zbv]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Thermotoga maritima]]
+<table><tr><td colspan='2'>[[2zbv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZBV FirstGlance]. <br>
-[[Category: Chen, L.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-[[Category: Chrzas, J.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADN:ADENOSINE'>ADN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: Ebihara, A.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zbv OCA], [https://pdbe.org/2zbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zbv RCSB], [https://www.ebi.ac.uk/pdbsum/2zbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zbv ProSAT], [https://www.topsan.org/Proteins/RSGI/2zbv TOPSAN]</span></td></tr>
-[[Category: Fu, Z.Q.]]
+</table>
-[[Category: Fujikawa, N.]]
+== Function ==
-[[Category: Fujimoto, Y.]]
+[https://www.uniprot.org/uniprot/Q9WZC8_THEMA Q9WZC8_THEMA]
-[[Category: Kagawa, W.]]
+== Evolutionary Conservation ==
-[[Category: Kuramitsu, S.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+Check<jmol>
-[[Category: Wang, B.C.]]
+  <jmolCheckbox>
-[[Category: Yokoyama, S.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zb/2zbv_consurf.spt"</scriptWhenChecked>
-[[Category: ADN]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: national project on protein structural and functional analyses]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: nppsfa]]
+  </jmolCheckbox>
-[[Category: riken structural genomics/proteomics initiative]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zbv ConSurf].
-[[Category: rsgi]]
+<div style="clear:both"></div>
-[[Category: structural genomics]]
+__TOC__
-[[Category: uncharacterized conserved protein]]
+</StructureSection>
-[[Category: unknown function]]
+[[Category: Large Structures]]
+[[Category: Thermotoga maritima MSB8]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:17:54 2008''
+[[Category: Chen L]]
+[[Category: Chrzas J]]
+[[Category: Ebihara A]]
+[[Category: Fu ZQ]]
+[[Category: Fujikawa N]]
+[[Category: Fujimoto Y]]
+[[Category: Kagawa W]]
+[[Category: Kuramitsu S]]
+[[Category: Wang BC]]
+[[Category: Yokoyama S]]