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[[Image:3bom.jpg|left|200px]]<br /><applet load="3bom" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3bom, resolution 1.350&Aring;" />
'''Crystal structure of trout hemoglobin at 1.35 Angstrom resolution'''<br />


==About this Structure==
==Crystal structure of trout hemoglobin at 1.35 Angstrom resolution==
3BOM is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Oncorhynchus_mykiss Oncorhynchus mykiss] with <scene name='pdbligand=ACE:'>ACE</scene>, <scene name='pdbligand=HEM:'>HEM</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOM OCA].  
<StructureSection load='3bom' size='340' side='right'caption='[[3bom]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3bom]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Oncorhynchus_mykiss Oncorhynchus mykiss]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BOM FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bom FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bom OCA], [https://pdbe.org/3bom PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bom RCSB], [https://www.ebi.ac.uk/pdbsum/3bom PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bom ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/HBA4_ONCMY HBA4_ONCMY] Involved in oxygen transport from gills to the various peripheral tissues.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/3bom_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bom ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Oncorhynchus mykiss]]
[[Category: Oncorhynchus mykiss]]
[[Category: Protein complex]]
[[Category: Aranda IV R]]
[[Category: Bingman, C A.]]
[[Category: Bingman CA]]
[[Category: Bitto, E.]]
[[Category: Bitto E]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Phillips Jr GN]]
[[Category: IV, R Aranda.]]
[[Category: Richards M]]
[[Category: Jr., G N.Phillips.]]
[[Category: Wesenberg GE]]
[[Category: Wesenberg, G E.]]
[[Category: ACE]]
[[Category: EDO]]
[[Category: HEM]]
[[Category: acetylation]]
[[Category: center for eukaryotic structural genomics]]
[[Category: cesg]]
[[Category: fish hemoglobin]]
[[Category: heme]]
[[Category: iron]]
[[Category: metal-binding]]
[[Category: oxygen storage/transport]]
[[Category: oxygen transport]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomics community request]]
[[Category: transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:06:46 2008''

Latest revision as of 11:49, 30 October 2024

Crystal structure of trout hemoglobin at 1.35 Angstrom resolutionCrystal structure of trout hemoglobin at 1.35 Angstrom resolution

Structural highlights

3bom is a 4 chain structure with sequence from Oncorhynchus mykiss. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.35Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HBA4_ONCMY Involved in oxygen transport from gills to the various peripheral tissues.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3bom, resolution 1.35Å

Drag the structure with the mouse to rotate

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