3by5: Difference between revisions

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New page: left|200px<br /><applet load="3by5" size="350" color="white" frame="true" align="right" spinBox="true" caption="3by5, resolution 2.52Å" /> '''Crystal structure of...
 
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[[Image:3by5.jpg|left|200px]]<br /><applet load="3by5" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3by5, resolution 2.52&Aring;" />
'''Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58'''<br />


==About this Structure==
==Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58==
3BY5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:So4 Binding Site For Residue A 201'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BY5 OCA].
<StructureSection load='3by5' size='340' side='right'caption='[[3by5]], [[Resolution|resolution]] 2.52&Aring;' scene=''>
[[Category: Agrobacterium tumefaciens str. c58]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BY5 FirstGlance]. <br>
[[Category: Almo, S.C.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.52&#8491;</td></tr>
[[Category: Bonanno, J.B.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Burley, S.K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3by5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3by5 OCA], [https://pdbe.org/3by5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3by5 RCSB], [https://www.ebi.ac.uk/pdbsum/3by5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3by5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3by5 TOPSAN]</span></td></tr>
[[Category: Iizuka, M.]]
</table>
[[Category: Maletic, M.]]
== Evolutionary Conservation ==
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Patskovsky, Y.]]
Check<jmol>
[[Category: Rutter, M.]]
  <jmolCheckbox>
[[Category: Sauder, J.M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/3by5_consurf.spt"</scriptWhenChecked>
[[Category: Sojitra, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Wasserman, S.R.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: SO4]]
  </jmolCheckbox>
[[Category: biosynthetic protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3by5 ConSurf].
[[Category: cobalamin biosynthesis protein]]
<div style="clear:both"></div>
[[Category: new york structural genomix research consortium]]
__TOC__
[[Category: nysgxrc]]
</StructureSection>
[[Category: protein structure initiative]]
[[Category: Large Structures]]
[[Category: psi-2]]
[[Category: Almo SC]]
[[Category: structural genomics]]
[[Category: Bonanno JB]]
[[Category: uncharacterized protein]]
[[Category: Burley SK]]
[[Category: unknown function]]
[[Category: Iizuka M]]
 
[[Category: Maletic M]]
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Jan 23 09:33:57 2008''
[[Category: Patskovsky Y]]
[[Category: Rutter M]]
[[Category: Sauder JM]]
[[Category: Sojitra S]]
[[Category: Wasserman SR]]

Latest revision as of 04:39, 21 November 2024

Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58Crystal structure of cobalamin biosynthesis protein chiG from Agrobacterium tumefaciens str. C58

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.52Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3by5, resolution 2.52Å

Drag the structure with the mouse to rotate

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