1z67: Difference between revisions

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==Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri==
==Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri==
<StructureSection load='1z67' size='340' side='right' caption='[[1z67]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='1z67' size='340' side='right'caption='[[1z67]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1z67]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457t Shigella flexneri 2a str. 2457t]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z67 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z67 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1z67]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z67 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yidB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198215 Shigella flexneri 2a str. 2457T])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z67 OCA], [https://pdbe.org/1z67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z67 RCSB], [https://www.ebi.ac.uk/pdbsum/1z67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z67 ProSAT], [https://www.topsan.org/Proteins/MCSG/1z67 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z67 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z67 RCSB], [http://www.ebi.ac.uk/pdbsum/1z67 PDBsum], [http://www.topsan.org/Proteins/MCSG/1z67 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A384K8I9_SHIFL A0A384K8I9_SHIFL]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z67_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z67_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z67 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Shigella flexneri 2a str. 2457t]]
[[Category: Large Structures]]
[[Category: Clancy, S]]
[[Category: Shigella flexneri 2a str. 2457T]]
[[Category: Collart, F]]
[[Category: Clancy S]]
[[Category: Dementieva, I]]
[[Category: Collart F]]
[[Category: Joachimiak, A]]
[[Category: Dementieva I]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Maltseva, N]]
[[Category: Maltseva N]]
[[Category: Osipiuk, J]]
[[Category: Osipiuk J]]
[[Category: Hypothetical protein]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Shigella flexneri]]
[[Category: Unknown function]]

Latest revision as of 10:44, 30 October 2024

Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneriStructure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri

Structural highlights

1z67 is a 1 chain structure with sequence from Shigella flexneri 2a str. 2457T. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.45Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A384K8I9_SHIFL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1z67, resolution 1.45Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA