1z67: Difference between revisions

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New page: left|200px<br /><applet load="1z67" size="450" color="white" frame="true" align="right" spinBox="true" caption="1z67, resolution 1.45Å" /> '''Structure of Homeodo...
 
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[[Image:1z67.gif|left|200px]]<br /><applet load="1z67" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1z67, resolution 1.45&Aring;" />
'''Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri'''<br />


==About this Structure==
==Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri==
1Z67 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a] with NA as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Z67 OCA].  
<StructureSection load='1z67' size='340' side='right'caption='[[1z67]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1z67]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z67 FirstGlance]. <br>
Structure of YidB protein from Shigella flexneri shows a new fold with homeodomain motif., Osipiuk J, Maltseva N, Dementieva I, Clancy S, Collart F, Joachimiak A, Proteins. 2006 Nov 1;65(2):509-13. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16927377 16927377]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
[[Category: Shigella flexneri 2a]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[Category: Single protein]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z67 OCA], [https://pdbe.org/1z67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z67 RCSB], [https://www.ebi.ac.uk/pdbsum/1z67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z67 ProSAT], [https://www.topsan.org/Proteins/MCSG/1z67 TOPSAN]</span></td></tr>
[[Category: Clancy, S.]]
</table>
[[Category: Collart, F.]]
== Function ==
[[Category: Dementieva, I.]]
[https://www.uniprot.org/uniprot/A0A384K8I9_SHIFL A0A384K8I9_SHIFL]  
[[Category: Joachimiak, A.]]
== Evolutionary Conservation ==
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Maltseva, N.]]
Check<jmol>
[[Category: Osipiuk, J.]]
  <jmolCheckbox>
[[Category: NA]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z67_consurf.spt"</scriptWhenChecked>
[[Category: hypothetical protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: mcsg]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: midwest center for structural genomics]]
  </jmolCheckbox>
[[Category: protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z67 ConSurf].
[[Category: psi]]
<div style="clear:both"></div>
[[Category: shigella flexneri]]
__TOC__
[[Category: structural genomics]]
</StructureSection>
 
[[Category: Large Structures]]
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 04:45:11 2007''
[[Category: Shigella flexneri 2a str. 2457T]]
[[Category: Clancy S]]
[[Category: Collart F]]
[[Category: Dementieva I]]
[[Category: Joachimiak A]]
[[Category: Maltseva N]]
[[Category: Osipiuk J]]

Latest revision as of 10:44, 30 October 2024

Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneriStructure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri

Structural highlights

1z67 is a 1 chain structure with sequence from Shigella flexneri 2a str. 2457T. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.45Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A384K8I9_SHIFL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1z67, resolution 1.45Å

Drag the structure with the mouse to rotate

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OCA
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