1yx1: Difference between revisions

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-[[Image:1yx1.gif|left|200px]]
- {{Structure
+==Crystal Structure of Protein of Unknown Function PA2260 from Pseudomonas aeruginosa, Possible Sugar Phosphate Isomerase==
-|PDB= 1yx1 |SIZE=350|CAPTION= <scene name='initialview01'>1yx1</scene>, resolution 1.80&Aring;
+<StructureSection load='1yx1' size='340' side='right'caption='[[1yx1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> and <scene name='pdbligand=IPA:ISOPROPYL ALCOHOL'>IPA</scene>
+<table><tr><td colspan='2'>[[1yx1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YX1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YX1 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-|GENE= PA2260 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yx1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yx1 OCA], [https://pdbe.org/1yx1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yx1 RCSB], [https://www.ebi.ac.uk/pdbsum/1yx1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yx1 ProSAT], [https://www.topsan.org/Proteins/MCSG/1yx1 TOPSAN]</span></td></tr>
+</table>
-'''Crystal Structure of Protein of Unknown Function PA2260 from Pseudomonas aeruginosa, Possible Sugar Phosphate Isomerase'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q9I1L3_PSEAE Q9I1L3_PSEAE]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-YX1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YX1 OCA].
+Check<jmol>
-[[Category: Pseudomonas aeruginosa]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yx/1yx1_consurf.spt"</scriptWhenChecked>
-[[Category: Edwards, A.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Joachimiak, A.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+  </jmolCheckbox>
-[[Category: Osipiuk, J.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yx1 ConSurf].
-[[Category: Savchenko, A.]]
+<div style="clear:both"></div>
-[[Category: Xu, X.]]
+__TOC__
-[[Category: IPA]]
+</StructureSection>
-[[Category: NA]]
+[[Category: Large Structures]]
-[[Category: hypothetical protein]]
+[[Category: Pseudomonas aeruginosa PAO1]]
-[[Category: mcsg]]
+[[Category: Edwards A]]
-[[Category: midwest center for structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: pa2260]]
+[[Category: Osipiuk J]]
-[[Category: protein structure initiative]]
+[[Category: Savchenko A]]
-[[Category: psi]]
+[[Category: Xu X]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:28:33 2008''