1uls: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1uls.jpg|left|200px]]<br /><applet load="1uls" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1uls, resolution 2.40&Aring;" />
-'''Crystal structure of tt0140 from Thermus thermophilus HB8'''<br />
-==About this Structure==
+==Crystal structure of tt0140 from Thermus thermophilus HB8==
-ULS is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Active as [http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1ULS OCA].
+<StructureSection load='1uls' size='340' side='right'caption='[[1uls]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-[[Category: 3-oxoacyl-[acyl-carrier-protein] reductase]]
+== Structural highlights ==
-[[Category: Protein complex]]
+<table><tr><td colspan='2'>[[1uls]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ULS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ULS FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uls FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uls OCA], [https://pdbe.org/1uls PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uls RCSB], [https://www.ebi.ac.uk/pdbsum/1uls PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uls ProSAT], [https://www.topsan.org/Proteins/RSGI/1uls TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q5SK98_THET8 Q5SK98_THET8]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ul/1uls_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uls ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermus thermophilus]]
-[[Category: Ago, H.]]
+[[Category: Ago H]]
-[[Category: Hamada, K.]]
+[[Category: Hamada K]]
-[[Category: Hisanaga, Y.]]
+[[Category: Hisanaga Y]]
-[[Category: Kuramitsu, S.]]
+[[Category: Kuramitsu S]]
-[[Category: Miyano, M.]]
+[[Category: Miyano M]]
-[[Category: Nodake, Y.]]
+[[Category: Nodake Y]]
-[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+[[Category: Sugahara M]]
-[[Category: Sugahara, M.]]
+[[Category: Yokoyama S]]
-[[Category: Yokoyama, S.]]
-[[Category: reductase]]
-[[Category: riken structural genomics/proteomics initiative]]
-[[Category: rsgi]]
-[[Category: structural genomics]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 04:11:05 2007''