1yhf: Difference between revisions

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-[[Image:1yhf.gif|left|200px]]
-<!--
+==Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes==
-The line below this paragraph, containing "STRUCTURE_1yhf", creates the "Structure Box" on the page.
+<StructureSection load='1yhf' size='340' side='right'caption='[[1yhf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1yhf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YHF FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_1yhf|  PDB=1yhf  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yhf OCA], [https://pdbe.org/1yhf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yhf RCSB], [https://www.ebi.ac.uk/pdbsum/1yhf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yhf ProSAT], [https://www.topsan.org/Proteins/MCSG/1yhf TOPSAN]</span></td></tr>
+</table>
-'''Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes'''
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-==About this Structure==
+  <jmolCheckbox>
-YHF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHF OCA].
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yh/1yhf_consurf.spt"</scriptWhenChecked>
-[[Category: Single protein]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Streptococcus pyogenes]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Collart, F.]]
+  </jmolCheckbox>
-[[Category: Joachimiak, A.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yhf ConSurf].
-[[Category: Lezondra, L.]]
+<div style="clear:both"></div>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+__TOC__
-[[Category: Moy, S.]]
+</StructureSection>
-[[Category: Osipiuk, J.]]
+[[Category: Large Structures]]
-[[Category: Conserved hypothetical protein]]
+[[Category: Streptococcus pyogenes M1 GAS]]
-[[Category: Mcsg]]
+[[Category: Collart F]]
-[[Category: Midwest center for structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: Protein structure initiative]]
+[[Category: Lezondra L]]
-[[Category: Psi]]
+[[Category: Moy S]]
-[[Category: Structural genomic]]
+[[Category: Osipiuk J]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 16:19:15 2008''