1y9k: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1y9k.gif|left|200px]]<br /><applet load="1y9k" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1y9k, resolution 2.39&Aring;" />
-'''IAA acetyltransferase from Bacillus cereus ATCC 14579'''<br />
-==About this Structure==
+==IAA acetyltransferase from Bacillus cereus ATCC 14579==
-Y9K is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Y9K OCA].
+<StructureSection load='1y9k' size='340' side='right'caption='[[1y9k]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
-[[Category: Bacillus cereus]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[1y9k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y9K FirstGlance]. <br>
-[[Category: Collart, F.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
-[[Category: Joachimiak, A.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: Li, H.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y9k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9k OCA], [https://pdbe.org/1y9k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y9k RCSB], [https://www.ebi.ac.uk/pdbsum/1y9k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y9k ProSAT], [https://www.topsan.org/Proteins/MCSG/1y9k TOPSAN]</span></td></tr>
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+</table>
-[[Category: Nocek, B.P.]]
+== Function ==
-[[Category: Osipiuk, J.]]
+[https://www.uniprot.org/uniprot/Q81FK8_BACCR Q81FK8_BACCR]
-[[Category: acetyltransferase]]
+== Evolutionary Conservation ==
-[[Category: bacillus cereus atcc 14579]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: iaa acetyltransferase]]
+Check<jmol>
-[[Category: midwest center for structural genomics (mcsg)]]
+  <jmolCheckbox>
-[[Category: protein structure initiative]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9k_consurf.spt"</scriptWhenChecked>
-[[Category: psi]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: structural genomics]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 03:46:41 2007''
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y9k ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Bacillus cereus ATCC 14579]]
+[[Category: Large Structures]]
+[[Category: Collart F]]
+[[Category: Joachimiak A]]
+[[Category: Li H]]
+[[Category: Nocek BP]]
+[[Category: Osipiuk J]]