1rj4: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Structure of a Cell Wall Invertase Inhibitor from Tobacco in Complex with Cd2+==
-<StructureSection load='1rj4' size='340' side='right' caption='[[1rj4]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='1rj4' size='340' side='right'caption='[[1rj4]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1rj4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/American_tobacco American tobacco]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RJ4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RJ4 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1rj4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RJ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RJ4 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rj1|1rj1]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NTINH1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4097 American tobacco])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rj4 OCA], [https://pdbe.org/1rj4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rj4 RCSB], [https://www.ebi.ac.uk/pdbsum/1rj4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rj4 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rj4 OCA], [http://pdbe.org/1rj4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rj4 RCSB], [http://www.ebi.ac.uk/pdbsum/1rj4 PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/O49908_TOBAC O49908_TOBAC]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rj/1rj4_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rj/1rj4_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 31: / Line 33: @@
 __TOC__
 </StructureSection>
-[[Category: American tobacco]]
+[[Category: Large Structures]]
-[[Category: Angelo, I D]]
+[[Category: Nicotiana tabacum]]
-[[Category: Greiner, S]]
+[[Category: D'Angelo I]]
-[[Category: Hothorn, M]]
+[[Category: Greiner S]]
-[[Category: Marquez, J A]]
+[[Category: Hothorn M]]
-[[Category: Scheffzek, K]]
+[[Category: Marquez JA]]
-[[Category: Bis-tris buffer]]
+[[Category: Scheffzek K]]
-[[Category: Cadmium coordination]]
-[[Category: Four-helix bundle]]
-[[Category: Helical hairpin]]
-[[Category: Protein binding]]