1vgg: Difference between revisions

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{{Seed}}
[[Image:1vgg.png|left|200px]]


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==Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_1vgg", creates the "Structure Box" on the page.
<StructureSection load='1vgg' size='340' side='right'caption='[[1vgg]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1vgg]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VGG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1vgg|  PDB=1vgg  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vgg OCA], [https://pdbe.org/1vgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vgg RCSB], [https://www.ebi.ac.uk/pdbsum/1vgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vgg ProSAT], [https://www.topsan.org/Proteins/RSGI/1vgg TOPSAN]</span></td></tr>
 
</table>
===Crystal Structure of the Conserved Hypothetical Protein TT1634 from Thermus Thermophilus HB8===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SJC3_THET8 Q5SJC3_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VGG OCA].  
Check<jmol>
[[Category: Ebihara, A.]]
  <jmolCheckbox>
[[Category: Kousumi, Y.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vg/1vgg_consurf.spt"</scriptWhenChecked>
[[Category: Kuramitsu, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Matsumoto, K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Okamoto, A.]]
  </jmolCheckbox>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vgg ConSurf].
[[Category: Satoh, S.]]
<div style="clear:both"></div>
[[Category: Tanaka, I.]]
__TOC__
[[Category: Yao, M.]]
</StructureSection>
[[Category: Yokoyama, S.]]
[[Category: Large Structures]]
[[Category: Conserved hypothetical protein]]
[[Category: Thermus thermophilus HB8]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Ebihara A]]
[[Category: Rsgi]]
[[Category: Kousumi Y]]
[[Category: Structural genomic]]
[[Category: Kuramitsu S]]
[[Category: Thermus thermophilus hb8]]
[[Category: Matsumoto K]]
 
[[Category: Okamoto A]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:12:55 2008''
[[Category: Satoh S]]
[[Category: Tanaka I]]
[[Category: Yao M]]
[[Category: Yokoyama S]]

Latest revision as of 03:36, 21 November 2024

Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8

Structural highlights

1vgg is a 6 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SJC3_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vgg, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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