2g7z: Difference between revisions

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-[[Image:2g7z.gif|left|200px]]
-<!--
+==Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids==
-The line below this paragraph, containing "STRUCTURE_2g7z", creates the "Structure Box" on the page.
+<StructureSection load='2g7z' size='340' side='right'caption='[[2g7z]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2g7z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G7Z FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HXA:DOCOSA-4,7,10,13,16,19-HEXAENOIC+ACID'>HXA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_2g7z|  PDB=2g7z  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g7z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g7z OCA], [https://pdbe.org/2g7z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g7z RCSB], [https://www.ebi.ac.uk/pdbsum/2g7z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g7z ProSAT], [https://www.topsan.org/Proteins/MCSG/2g7z TOPSAN]</span></td></tr>
+</table>
-'''Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids'''
+== Function ==
+[https://www.uniprot.org/uniprot/Y1493_STRP1 Y1493_STRP1] Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-G7Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_m1 Streptococcus pyogenes serotype m1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7Z OCA].
+Check<jmol>
-[[Category: Single protein]]
+  <jmolCheckbox>
-[[Category: Streptococcus pyogenes serotype m1]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g7/2g7z_consurf.spt"</scriptWhenChecked>
-[[Category: Clancy, S.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Joachimiak, A.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+  </jmolCheckbox>
-[[Category: Nocek, B.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g7z ConSurf].
-[[Category: Volkart, L.]]
+<div style="clear:both"></div>
-[[Category: Hypothetical protein]]
+__TOC__
-[[Category: Lipid binding protein]]
+</StructureSection>
-[[Category: Long-fatty acid binding protein]]
+[[Category: Large Structures]]
-[[Category: Mcsg]]
+[[Category: Streptococcus pyogenes M1 GAS]]
-[[Category: Midwest center for structural genomic]]
+[[Category: Clancy S]]
-[[Category: Protein structure initiative]]
+[[Category: Joachimiak A]]
-[[Category: Psi]]
+[[Category: Nocek B]]
-[[Category: Structural genomic]]
+[[Category: Volkart L]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 04:47:53 2008''