2g7z: Difference between revisions

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OCA

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 ==Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids==
-<StructureSection load='2g7z' size='340' side='right' caption='[[2g7z]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+<StructureSection load='2g7z' size='340' side='right'caption='[[2g7z]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2g7z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_(serotype_1_/_m1_gas) Streptococcus pyogenes (serotype 1 / m1 gas)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G7Z FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2g7z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G7Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G7Z FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HXA:DOCOSA-4,7,10,13,16,19-HEXAENOIC+ACID'>HXA</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HXA:DOCOSA-4,7,10,13,16,19-HEXAENOIC+ACID'>HXA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1mgp|1mgp]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g7z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g7z OCA], [https://pdbe.org/2g7z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g7z RCSB], [https://www.ebi.ac.uk/pdbsum/2g7z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g7z ProSAT], [https://www.topsan.org/Proteins/MCSG/2g7z TOPSAN]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g7z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g7z OCA], [http://pdbe.org/2g7z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g7z RCSB], [http://www.ebi.ac.uk/pdbsum/2g7z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2g7z ProSAT], [http://www.topsan.org/Proteins/MCSG/2g7z TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/Y1493_STRP1 Y1493_STRP1]] Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
+[https://www.uniprot.org/uniprot/Y1493_STRP1 Y1493_STRP1] Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 16: / Line 15: @@
    <jmolCheckbox>
      <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g7/2g7z_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 23: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Clancy, S]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A]]
+[[Category: Streptococcus pyogenes M1 GAS]]
-[[Category: Structural genomic]]
+[[Category: Clancy S]]
-[[Category: Nocek, B]]
+[[Category: Joachimiak A]]
-[[Category: Volkart, L]]
+[[Category: Nocek B]]
-[[Category: Hypothetical protein]]
+[[Category: Volkart L]]
-[[Category: Lipid binding protein]]
-[[Category: Long-fatty acid binding protein]]
-[[Category: Mcsg]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Unknown function]]