2ffn: Difference between revisions

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New page: left|200px<br /><applet load="2ffn" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ffn, resolution 1.8Å" /> '''The E41Q mutant of te...
 
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[[Image:2ffn.jpg|left|200px]]<br /><applet load="2ffn" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2ffn, resolution 1.8&Aring;" />
'''The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F'''<br />


==About this Structure==
==The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F==
2FFN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris] with HEM as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2FFN OCA].  
<StructureSection load='2ffn' size='340' side='right'caption='[[2ffn]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
[[Category: Desulfovibrio vulgaris]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2ffn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'Miyazaki_F' Desulfovibrio vulgaris str. 'Miyazaki F']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFN FirstGlance]. <br>
[[Category: Higuchi, Y.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
[[Category: Komori, H.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
[[Category: Morita, K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffn OCA], [https://pdbe.org/2ffn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffn RCSB], [https://www.ebi.ac.uk/pdbsum/2ffn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffn ProSAT]</span></td></tr>
[[Category: HEM]]
</table>
[[Category: cytochrome c3]]
== Function ==
[https://www.uniprot.org/uniprot/CYC3_NITV9 CYC3_NITV9] Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffn_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ffn ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 10:32:06 2007''
==See Also==
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
__TOC__
</StructureSection>
[[Category: Desulfovibrio vulgaris str. 'Miyazaki F']]
[[Category: Large Structures]]
[[Category: Higuchi Y]]
[[Category: Komori H]]
[[Category: Morita K]]

Latest revision as of 12:44, 25 December 2024

The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki FThe E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F

Structural highlights

2ffn is a 1 chain structure with sequence from Desulfovibrio vulgaris str. 'Miyazaki F'. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CYC3_NITV9 Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ffn, resolution 1.80Å

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