2ffn: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F==
==The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F==
<StructureSection load='2ffn' size='340' side='right' caption='[[2ffn]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='2ffn' size='340' side='right'caption='[[2ffn]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ffn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvm Desvm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FFN FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ffn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'Miyazaki_F' Desulfovibrio vulgaris str. 'Miyazaki F']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFN FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ffn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffn OCA], [http://pdbe.org/2ffn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ffn RCSB], [http://www.ebi.ac.uk/pdbsum/2ffn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffn ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffn OCA], [https://pdbe.org/2ffn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffn RCSB], [https://www.ebi.ac.uk/pdbsum/2ffn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffn ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CYC3_DESVM CYC3_DESVM]] Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.  
[https://www.uniprot.org/uniprot/CYC3_NITV9 CYC3_NITV9] Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffn_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffn_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 21: Line 22:


==See Also==
==See Also==
*[[Cytochrome c|Cytochrome c]]
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Desvm]]
[[Category: Desulfovibrio vulgaris str. 'Miyazaki F']]
[[Category: Higuchi, Y]]
[[Category: Large Structures]]
[[Category: Komori, H]]
[[Category: Higuchi Y]]
[[Category: Morita, K]]
[[Category: Komori H]]
[[Category: Cytochrome c3]]
[[Category: Morita K]]
[[Category: Electron transport]]

Latest revision as of 12:44, 25 December 2024

The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki FThe E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F

Structural highlights

2ffn is a 1 chain structure with sequence from Desulfovibrio vulgaris str. 'Miyazaki F'. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CYC3_NITV9 Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ffn, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2ffn&oldid=4201965"