2epe: Difference between revisions

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{{Seed}}
[[Image:2epe.png|left|200px]]


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==Crystal structure analysis of Hen egg white lysozyme grown by capillary method==
The line below this paragraph, containing "STRUCTURE_2epe", creates the "Structure Box" on the page.
<StructureSection load='2epe' size='340' side='right'caption='[[2epe]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2epe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EPE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2epe OCA], [https://pdbe.org/2epe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2epe RCSB], [https://www.ebi.ac.uk/pdbsum/2epe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2epe ProSAT]</span></td></tr>
{{STRUCTURE_2epe| PDB=2epe |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/2epe_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2epe ConSurf].
<div style="clear:both"></div>


===Crystal structure analysis of Hen egg white lysozyme grown by capillary method===
==See Also==
 
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
 
== References ==
==About this Structure==
<references/>
2EPE is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPE OCA].
__TOC__
</StructureSection>
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
[[Category: Lysozyme]]
[[Category: Large Structures]]
[[Category: Arumugam, V.]]
[[Category: Arumugam V]]
[[Category: Jaimohan, S M.]]
[[Category: Jaimohan SM]]
[[Category: Mandal, A B.]]
[[Category: Mandal AB]]
[[Category: Naresh, M D.]]
[[Category: Naresh MD]]
[[Category: Rajaram, A.]]
[[Category: Rajaram A]]
[[Category: Subramanian, V.]]
[[Category: Subramanian V]]
[[Category: Usha, R.]]
[[Category: Usha R]]
[[Category: Hen egg white lysozyme]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 21:54:27 2009''

Latest revision as of 03:53, 21 November 2024

Crystal structure analysis of Hen egg white lysozyme grown by capillary methodCrystal structure analysis of Hen egg white lysozyme grown by capillary method

Structural highlights

2epe is a 1 chain structure with sequence from Gallus gallus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LYSC_CHICK Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Maehashi K, Matano M, Irisawa T, Uchino M, Kashiwagi Y, Watanabe T. Molecular characterization of goose- and chicken-type lysozymes in emu (Dromaius novaehollandiae): evidence for extremely low lysozyme levels in emu egg white. Gene. 2012 Jan 15;492(1):244-9. doi: 10.1016/j.gene.2011.10.021. Epub 2011 Oct, 25. PMID:22044478 doi:10.1016/j.gene.2011.10.021

2epe, resolution 2.50Å

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