2dld: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2dld.gif|left|200px]]


{{Structure
==D-LACTATE DEHYDROGENASE COMPLEXED WITH NADH AND OXAMATE==
|PDB= 2dld |SIZE=350|CAPTION= <scene name='initialview01'>2dld</scene>, resolution 2.7&Aring;
<StructureSection load='2dld' size='340' side='right'caption='[[2dld]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene> and <scene name='pdbligand=OXM:OXAMIC ACID'>OXM</scene>
<table><tr><td colspan='2'>[[2dld]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_helveticus Lactobacillus helveticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DLD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DLD FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/D-lactate_dehydrogenase D-lactate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.28 1.1.1.28]  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=OXM:OXAMIC+ACID'>OXM</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dld FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dld OCA], [https://pdbe.org/2dld PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dld RCSB], [https://www.ebi.ac.uk/pdbsum/2dld PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dld ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LDHD_LACHE LDHD_LACHE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/2dld_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dld ConSurf].
<div style="clear:both"></div>


'''D-LACTATE DEHYDROGENASE COMPLEXED WITH NADH AND OXAMATE'''
==See Also==
 
*[[Lactate dehydrogenase 3D structures|Lactate dehydrogenase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2DLD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_helveticus Lactobacillus helveticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DLD OCA].
[[Category: D-lactate dehydrogenase]]
[[Category: Lactobacillus helveticus]]
[[Category: Lactobacillus helveticus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Dunn, C R.]]
[[Category: Dunn CR]]
[[Category: Holbrook, J J.]]
[[Category: Holbrook JJ]]
[[Category: NAD]]
[[Category: OXM]]
[[Category: oxidoreductase (choh(d)-nad+(a))]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:28:31 2008''

Latest revision as of 12:44, 25 December 2024

D-LACTATE DEHYDROGENASE COMPLEXED WITH NADH AND OXAMATED-LACTATE DEHYDROGENASE COMPLEXED WITH NADH AND OXAMATE

Structural highlights

2dld is a 2 chain structure with sequence from Lactobacillus helveticus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LDHD_LACHE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dld, resolution 2.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2dld&oldid=4201821"