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==Crystal Structure of the S54N variant of murine T cell receptor Vbeta 8.2 domain== | ==Crystal Structure of the S54N variant of murine T cell receptor Vbeta 8.2 domain== | ||
<StructureSection load='2apb' size='340' side='right' caption='[[2apb]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2apb' size='340' side='right'caption='[[2apb]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2apb]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2apb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2APB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2APB FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2apb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2apb OCA], [https://pdbe.org/2apb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2apb RCSB], [https://www.ebi.ac.uk/pdbsum/2apb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2apb ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/A2NAI0_RAT A2NAI0_RAT] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/2apb_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/2apb_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2apb ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[T-cell receptor|T-cell receptor]] | *[[T-cell receptor 3D structures|T-cell receptor 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Cho | [[Category: Rattus norvegicus]] | ||
[[Category: Guan | [[Category: Cho S]] | ||
[[Category: Kerzic | [[Category: Guan R]] | ||
[[Category: Kieke | [[Category: Kerzic MC]] | ||
[[Category: Kranz | [[Category: Kieke MC]] | ||
[[Category: Mariuzza | [[Category: Kranz DM]] | ||
[[Category: Sundberg | [[Category: Mariuzza RA]] | ||
[[Category: Swaminathan | [[Category: Sundberg EJ]] | ||
[[Category: Yang | [[Category: Swaminathan CP]] | ||
[[Category: Yang J]] | |||
Latest revision as of 12:00, 6 November 2024
Crystal Structure of the S54N variant of murine T cell receptor Vbeta 8.2 domainCrystal Structure of the S54N variant of murine T cell receptor Vbeta 8.2 domain
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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