1xj5: Difference between revisions

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New page: left|200px<br /><applet load="1xj5" size="450" color="white" frame="true" align="right" spinBox="true" caption="1xj5, resolution 2.70Å" /> '''X-RAY STRUCTURE OF S...
 
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[[Image:1xj5.jpg|left|200px]]<br /><applet load="1xj5" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1xj5, resolution 2.70&Aring;" />
'''X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820'''<br />


==About this Structure==
==X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820==
1XJ5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Active as [http://en.wikipedia.org/wiki/Spermidine_synthase Spermidine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.16 2.5.1.16] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1XJ5 OCA].  
<StructureSection load='1xj5' size='340' side='right'caption='[[1xj5]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1xj5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XJ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XJ5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xj5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xj5 OCA], [https://pdbe.org/1xj5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xj5 RCSB], [https://www.ebi.ac.uk/pdbsum/1xj5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xj5 ProSAT], [https://www.topsan.org/Proteins/CESG/1xj5 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SPDS1_ARATH SPDS1_ARATH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xj/1xj5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xj5 ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Spermidine synthase 3D structures|Spermidine synthase 3D structures]]
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Spermidine synthase]]
[[Category: Allard STM]]
[[Category: Allard, S.T.M.]]
[[Category: Bingman CA]]
[[Category: Bingman, C.A.]]
[[Category: Bitto E]]
[[Category: Bitto, E.]]
[[Category: Phillips Jr GN]]
[[Category: CESG, Center.for.Eukaryotic.Structural.Genomics.]]
[[Category: Smith DW]]
[[Category: Jr., G.N.Phillips.]]
[[Category: Wesenberg GE]]
[[Category: Smith, D.W.]]
[[Category: Wesenberg, G.E.]]
[[Category: at1g23820]]
[[Category: center for eukaryotic structural genomics]]
[[Category: cesg]]
[[Category: polyamine]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: putrescine aminopropyl transferase]]
[[Category: spds1]]
[[Category: spermidine synthase]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 06:06:41 2007''

Latest revision as of 10:37, 30 October 2024

X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820

Structural highlights

1xj5 is a 4 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

SPDS1_ARATH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1xj5, resolution 2.70Å

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