1tk9: Difference between revisions

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[[Image:1tk9.png|left|200px]]


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==Crystal Structure of Phosphoheptose isomerase 1==
The line below this paragraph, containing "STRUCTURE_1tk9", creates the "Structure Box" on the page.
<StructureSection load='1tk9' size='340' side='right'caption='[[1tk9]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1tk9|  PDB=1tk9  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [https://pdbe.org/1tk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [https://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
 
</table>
===Crystal Structure of Phosphoheptose isomerase 1===
== Function ==
 
[https://www.uniprot.org/uniprot/GMHA1_CAMJE GMHA1_CAMJE] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1TK9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tk9_consurf.spt"</scriptWhenChecked>
Crystal structures of two putative phosphoheptose isomerases., Seetharaman J, Rajashankar KR, Solorzano V, Kniewel R, Lima CD, Bonanno JB, Burley SK, Swaminathan S, Proteins. 2006 Jun 1;63(4):1092-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16477602 16477602]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tk9 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Kniewel, R.]]
[[Category: Kniewel R]]
[[Category: Lima, C D.]]
[[Category: Lima CD]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Rajashankar KR]]
[[Category: Rajashankar, K R.]]
[[Category: Solorzano V]]
[[Category: Solorzano, V.]]
[[Category: Lipopolysaccharide biosynthesis]]
[[Category: Lpc1_camje]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: T1512]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 20:54:01 2008''

Latest revision as of 10:28, 30 October 2024

Crystal Structure of Phosphoheptose isomerase 1Crystal Structure of Phosphoheptose isomerase 1

Structural highlights

1tk9 is a 4 chain structure with sequence from Campylobacter jejuni. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

GMHA1_CAMJE Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1tk9, resolution 2.10Å

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