1tk9: Difference between revisions

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[[Image:1tk9.jpg|left|200px]]


{{Structure
==Crystal Structure of Phosphoheptose isomerase 1==
|PDB= 1tk9 |SIZE=350|CAPTION= <scene name='initialview01'>1tk9</scene>, resolution 2.10&Aring;
<StructureSection load='1tk9' size='340' side='right'caption='[[1tk9]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1tk9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TK9 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE= LPCA1, GMHA1, CJ1149C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 Campylobacter jejuni])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK00414 gmhA]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [https://pdbe.org/1tk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB], [https://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tk9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1tk9 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tk9 OCA], [http://www.ebi.ac.uk/pdbsum/1tk9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tk9 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/GMHA1_CAMJE GMHA1_CAMJE] Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).
 
== Evolutionary Conservation ==
'''Crystal Structure of Phosphoheptose isomerase 1'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tk9_consurf.spt"</scriptWhenChecked>
1TK9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TK9 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==Reference==
  </jmolCheckbox>
Crystal structures of two putative phosphoheptose isomerases., Seetharaman J, Rajashankar KR, Solorzano V, Kniewel R, Lima CD, Bonanno JB, Burley SK, Swaminathan S, Proteins. 2006 Jun 1;63(4):1092-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16477602 16477602]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tk9 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Kniewel, R.]]
[[Category: Kniewel R]]
[[Category: Lima, C D.]]
[[Category: Lima CD]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Rajashankar KR]]
[[Category: Rajashankar, K R.]]
[[Category: Solorzano V]]
[[Category: Solorzano, V.]]
[[Category: lipopolysaccharide biosynthesis]]
[[Category: lpc1_camje]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
[[Category: t1512]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:57:14 2008''

Latest revision as of 10:28, 30 October 2024

Crystal Structure of Phosphoheptose isomerase 1Crystal Structure of Phosphoheptose isomerase 1

Structural highlights

1tk9 is a 4 chain structure with sequence from Campylobacter jejuni. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

GMHA1_CAMJE Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1tk9, resolution 2.10Å

Drag the structure with the mouse to rotate

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