1owq: Difference between revisions

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[[Image:1owq.png|left|200px]]


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==Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution==
The line below this paragraph, containing "STRUCTURE_1owq", creates the "Structure Box" on the page.
<StructureSection load='1owq' size='340' side='right'caption='[[1owq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1owq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OWQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OWQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
{{STRUCTURE_1owq| PDB=1owq |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1owq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1owq OCA], [https://pdbe.org/1owq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1owq RCSB], [https://www.ebi.ac.uk/pdbsum/1owq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1owq ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CH3L1_BOVIN CH3L1_BOVIN] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).<ref>PMID:16929095</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ow/1owq_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1owq ConSurf].
<div style="clear:both"></div>


===Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution===
==See Also==
 
*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
 
== References ==
==About this Structure==
<references/>
1OWQ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OWQ OCA].
__TOC__
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
[[Category: Bhushan, A.]]
[[Category: Large Structures]]
[[Category: Jasti, J.]]
[[Category: Bhushan A]]
[[Category: Kumar, J.]]
[[Category: Jasti J]]
[[Category: Sharma, S.]]
[[Category: Kumar J]]
[[Category: Singh, T P.]]
[[Category: Sharma S]]
[[Category: Mgp]]
[[Category: Singh TP]]
[[Category: Signalling protein]]
[[Category: Spc-40]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:38:24 2009''

Latest revision as of 10:10, 30 October 2024

Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involutionCrystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution

Structural highlights

1owq is a 1 chain structure with sequence from Bos taurus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CH3L1_BOVIN Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Kumar J, Ethayathulla AS, Srivastava DB, Sharma S, Singh SB, Srinivasan A, Yadav MP, Singh TP. Structure of a bovine secretory signalling glycoprotein (SPC-40) at 2.1 Angstrom resolution. Acta Crystallogr D Biol Crystallogr. 2006 Sep;62(Pt 9):953-63. Epub 2006, Aug 19. PMID:16929095 doi:10.1107/S0907444906020427

1owq, resolution 2.00Å

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