1lxn: Difference between revisions

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 ==X-RAY STRUCTURE OF MTH1187 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT272==
-<StructureSection load='1lxn' size='340' side='right' caption='[[1lxn]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+<StructureSection load='1lxn' size='340' side='right'caption='[[1lxn]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1lxn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"methanobacterium_thermoautotrophicus"_(sic)_zeikus_and_wolfe_1972 "methanobacterium thermoautotrophicus" (sic) zeikus and wolfe 1972]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LXN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1LXN FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1lxn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LXN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LXN FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1lxj|1lxj]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lxn OCA], [https://pdbe.org/1lxn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lxn RCSB], [https://www.ebi.ac.uk/pdbsum/1lxn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lxn ProSAT], [https://www.topsan.org/Proteins/NESGC/1lxn TOPSAN]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lxn OCA], [http://pdbe.org/1lxn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1lxn RCSB], [http://www.ebi.ac.uk/pdbsum/1lxn PDBsum], [http://www.topsan.org/Proteins/NESGC/1lxn TOPSAN]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Y1187_METTH Y1187_METTH]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/1lxn_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/1lxn_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lxn ConSurf].
 <div style="clear:both"></div>
 __TOC__
 </StructureSection>
-[[Category: Arrowsmith, C H]]
+[[Category: Large Structures]]
-[[Category: Christendat, D]]
+[[Category: Methanothermobacter thermautotrophicus]]
-[[Category: Edwards, A]]
+[[Category: Arrowsmith CH]]
-[[Category: Khayat, R]]
+[[Category: Christendat D]]
-[[Category: Structural genomic]]
+[[Category: Edwards A]]
-[[Category: Savchenko, A]]
+[[Category: Khayat R]]
-[[Category: Tao, X]]
+[[Category: Savchenko A]]
-[[Category: Tong, L]]
+[[Category: Tao X]]
-[[Category: Xu, X]]
+[[Category: Tong L]]
-[[Category: Hypothetical structure]]
+[[Category: Xu X]]
-[[Category: Nesg]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Unknown function]]