1ku9: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1ku9.gif|left|200px]]


{{Structure
==X-ray Structure of a Methanococcus jannaschii DNA-Binding Protein: Implications for Antibiotic Resistance in Staphylococcus aureus==
|PDB= 1ku9 |SIZE=350|CAPTION= <scene name='initialview01'>1ku9</scene>, resolution 2.8&Aring;
<StructureSection load='1ku9' size='340' side='right'caption='[[1ku9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1ku9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KU9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KU9 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
|GENE= Mj223 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 Methanocaldococcus jannaschii])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00090 HTH_ARSR]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ku9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ku9 OCA], [https://pdbe.org/1ku9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ku9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ku9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ku9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ku9 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ku9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ku9 OCA], [http://www.ebi.ac.uk/pdbsum/1ku9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ku9 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Y1563_METJA Y1563_METJA]
 
== Evolutionary Conservation ==
'''X-ray Structure of a Methanococcus jannaschii DNA-Binding Protein: Implications for Antibiotic Resistance in Staphylococcus aureus'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ku/1ku9_consurf.spt"</scriptWhenChecked>
1KU9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KU9 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==Reference==
  </jmolCheckbox>
X-ray structure of an M. jannaschii DNA-binding protein: implications for antibiotic resistance in S. aureus., Ray SS, Bonanno JB, Chen H, de Lencastre H, Wu S, Tomasz A, Burley SK, Proteins. 2003 Jan 1;50(1):170-3. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12471609 12471609]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ku9 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Single protein]]
[[Category: Bonanno JB]]
[[Category: Bonanno, J B.]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Chen H]]
[[Category: Chen, H.]]
[[Category: Ray SS]]
[[Category: Lencastre, H de.]]
[[Category: Tomasz A]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Wu S]]
[[Category: Ray, S S.]]
[[Category: De Lencastre H]]
[[Category: Tomasz, A.]]
[[Category: Wu, S.]]
[[Category: homodimeric winged-helix fold]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: putative transcription factor]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:53:42 2008''

Latest revision as of 09:55, 30 October 2024

X-ray Structure of a Methanococcus jannaschii DNA-Binding Protein: Implications for Antibiotic Resistance in Staphylococcus aureusX-ray Structure of a Methanococcus jannaschii DNA-Binding Protein: Implications for Antibiotic Resistance in Staphylococcus aureus

Structural highlights

1ku9 is a 2 chain structure with sequence from Methanocaldococcus jannaschii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Y1563_METJA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1ku9, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1ku9&oldid=4199361"