1k9b: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Crystal structure of the bifunctional soybean Bowman-Birk inhibitor at 0.28 nm resolution. Structural peculiarities in a folded protein conformation==
-<StructureSection load='1k9b' size='340' side='right' caption='[[1k9b]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+<StructureSection load='1k9b' size='340' side='right'caption='[[1k9b]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1k9b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K9B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K9B FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1k9b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K9B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K9B FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1d6r|1d6r]], [[1bbi|1bbi]], [[1pbi|1pbi]], [[1c2a|1c2a]], [[1pi2|1pi2]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k9b OCA], [http://pdbe.org/1k9b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1k9b RCSB], [http://www.ebi.ac.uk/pdbsum/1k9b PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k9b OCA], [https://pdbe.org/1k9b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k9b RCSB], [https://www.ebi.ac.uk/pdbsum/1k9b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k9b ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/IBB1_SOYBN IBB1_SOYBN]] Inhibitor of trypsin and of chymotrypsin.
+[https://www.uniprot.org/uniprot/IBB1_SOYBN IBB1_SOYBN] Inhibitor of trypsin and of chymotrypsin.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k9/1k9b_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k9/1k9b_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k9b ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 29: / Line 30: @@
 ==See Also==
-*[[Trypsin inhibitor|Trypsin inhibitor]]
+*[[Trypsin inhibitor 3D structures|Trypsin inhibitor 3D structures]]
 == References ==
 <references/>
@@ Line 35: / Line 36: @@
 </StructureSection>
 [[Category: Glycine max]]
-[[Category: Ermler, U]]
+[[Category: Large Structures]]
-[[Category: Essen, L O]]
+[[Category: Ermler U]]
-[[Category: Flecker, P]]
+[[Category: Essen LO]]
-[[Category: Kim, Y M]]
+[[Category: Flecker P]]
-[[Category: Voss, R H]]
+[[Category: Kim YM]]
-[[Category: Wenzl, G]]
+[[Category: Voss RH]]
-[[Category: Double-headed]]
+[[Category: Wenzl G]]
-[[Category: Hydrolase inhibitor]]
-[[Category: Tripple-stranded beta hairpin]]