1k7u: Difference between revisions

No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Crystal Structure Analysis of crosslinked-WGA3/GlcNAcbeta1,4GlcNAc complex==
==Crystal Structure Analysis of crosslinked-WGA3/GlcNAcbeta1,4GlcNAc complex==
<StructureSection load='1k7u' size='340' side='right' caption='[[1k7u]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='1k7u' size='340' side='right'caption='[[1k7u]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1k7u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K7U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K7U FirstGlance]. <br>
<table><tr><td colspan='2'>[[1k7u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K7U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K7U FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1wgt|1wgt]], [[1k7t|1k7t]], [[1k7v|1k7v]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k7u OCA], [https://pdbe.org/1k7u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k7u RCSB], [https://www.ebi.ac.uk/pdbsum/1k7u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k7u ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k7u OCA], [http://pdbe.org/1k7u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1k7u RCSB], [http://www.ebi.ac.uk/pdbsum/1k7u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1k7u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/AGI3_WHEAT AGI3_WHEAT]] N-acetyl-D-glucosamine / N-acetyl-D-neuraminic acid binding lectin.  
[https://www.uniprot.org/uniprot/AGI3_WHEAT AGI3_WHEAT] N-acetyl-D-glucosamine / N-acetyl-D-neuraminic acid binding lectin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/1k7u_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/1k7u_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 1k7u" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1k7u" style="background-color:#fffaf0;"></div>
==See Also==
*[[Agglutinin 3D structures|Agglutinin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Triticum aestivum]]
[[Category: Triticum aestivum]]
[[Category: Harata, K]]
[[Category: Harata K]]
[[Category: Ishimura, M]]
[[Category: Ishimura M]]
[[Category: Muraki, M]]
[[Category: Muraki M]]
[[Category: Hevein-type fold]]
[[Category: Sugar binding protein]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA