1jhy: Difference between revisions

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 ==Three-dimensional Structure of CobT in Complex with Phenol and Nicotinate==
-<StructureSection load='1jhy' size='340' side='right' caption='[[1jhy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='1jhy' size='340' side='right'caption='[[1jhy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1jhy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_cholerae-suis"_smith_1894 "bacillus cholerae-suis" smith 1894]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JHY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JHY FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1jhy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica Salmonella enterica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JHY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JHY FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IPH:PHENOL'>IPH</scene>, <scene name='pdbligand=NIO:NICOTINIC+ACID'>NIO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1d0s|1d0s]], [[1d0v|1d0v]], [[1jha|1jha]], [[1jhx|1jhx]], [[1jhq|1jhq]], [[1jh8|1jh8]], [[1jhv|1jhv]], [[1jhp|1jhp]], [[1jhu|1jhu]], [[1jhr|1jhr]], [[1jhm|1jhm]], [[1jho|1jho]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IPH:PHENOL'>IPH</scene>, <scene name='pdbligand=NIO:NICOTINIC+ACID'>NIO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide--dimethylbenzimidazole_phosphoribosyltransferase Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.21 2.4.2.21] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jhy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jhy OCA], [https://pdbe.org/1jhy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jhy RCSB], [https://www.ebi.ac.uk/pdbsum/1jhy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jhy ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jhy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jhy OCA], [http://pdbe.org/1jhy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jhy RCSB], [http://www.ebi.ac.uk/pdbsum/1jhy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1jhy ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/COBT_SALTY COBT_SALTY]] Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
+[https://www.uniprot.org/uniprot/COBT_SALTY COBT_SALTY] Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
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    <jmolCheckbox>
      <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jh/1jhy_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 30: / Line 29: @@
 </div>
 <div class="pdbe-citations 1jhy" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bacillus cholerae-suis smith 1894]]
+[[Category: Large Structures]]
-[[Category: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase]]
+[[Category: Salmonella enterica]]
-[[Category: Cheong, C G]]
+[[Category: Cheong CG]]
-[[Category: Escalante-Semerena, J]]
+[[Category: Escalante-Semerena J]]
-[[Category: Rayment, I]]
+[[Category: Rayment I]]
-[[Category: Cobalamin biosynthesis]]
-[[Category: Cobamide]]
-[[Category: Cobt]]
-[[Category: Lower ligand]]
-[[Category: N1-alpha-phosphoribosyltransferase]]
-[[Category: Nn:dbi prt]]
-[[Category: Transferase]]