1jev: Difference between revisions

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-[[Image:1jev.jpg|left|200px]]
- {{Structure
+==OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK==
-|PDB= 1jev |SIZE=350|CAPTION= <scene name='initialview01'>1jev</scene>, resolution 1.3&Aring;
+<StructureSection load='1jev' size='340' side='right'caption='[[1jev]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=IUM:URANYL (VI) ION'>IUM</scene>
+<table><tr><td colspan='2'>[[1jev]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JEV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JEV FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IUM:URANYL+(VI)+ION'>IUM</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jev FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jev OCA], [https://pdbe.org/1jev PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jev RCSB], [https://www.ebi.ac.uk/pdbsum/1jev PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jev ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/OPPA_SALTY OPPA_SALTY] This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/je/1jev_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jev ConSurf].
+<div style="clear:both"></div>
-'''OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK'''
+==See Also==
+*[[ABC transporter 3D structures|ABC transporter 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-JEV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JEV OCA].
+[[Category: Large Structures]]
+[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-==Reference==
+[[Category: Tame J]]
-The role of water in sequence-independent ligand binding by an oligopeptide transporter protein., Tame JR, Sleigh SH, Wilkinson AJ, Ladbury JE, Nat Struct Biol. 1996 Dec;3(12):998-1001. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8946852 8946852]
+[[Category: Wilkinson AJ]]
-[[Category: Salmonella typhimurium]]
-[[Category: Single protein]]
-[[Category: Tame, J.]]
-[[Category: Wilkinson, A J.]]
-[[Category: IUM]]
-[[Category: complex (peptide transport/peptide)]]
-[[Category: peptide transport]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 12:02:31 2008''