1j9a: Difference between revisions

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-{{Seed}}
-[[Image:1j9a.png|left|200px]]
-<!--
+==OLIGORIBONUCLEASE==
-The line below this paragraph, containing "STRUCTURE_1j9a", creates the "Structure Box" on the page.
+<StructureSection load='1j9a' size='340' side='right'caption='[[1j9a]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1j9a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J9A FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1j9a|  PDB=1j9a  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j9a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j9a OCA], [https://pdbe.org/1j9a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j9a RCSB], [https://www.ebi.ac.uk/pdbsum/1j9a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j9a ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ORN_HAEIN ORN_HAEIN] 3'-to-5' exoribonuclease specific for small oligoribonucleotides (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/1j9a_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j9a ConSurf].
+<div style="clear:both"></div>
-===OLIGORIBONUCLEASE===
+==See Also==
+*[[Exonuclease 3D structures|Exonuclease 3D structures]]
+*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
-==About this Structure==
+__TOC__
-J9A is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9A OCA].
+</StructureSection>
-[[Category: Haemophilus influenzae]]
-[[Category: Bonander, N.]]
-[[Category: Eisenstein, E.]]
-[[Category: Gilliland, G L.]]
-[[Category: Ladner, J E.]]
-[[Category: S2F, Structure 2.Function Project.]]
-[[Category: Tordova, M.]]
-[[Category: Exoribonuclease]]
 [[Category: Haemophilus influenzae]]
-[[Category: Oligoribonuclease]]
+[[Category: Large Structures]]
-[[Category: Ribonuclease]]
+[[Category: Bonander N]]
-[[Category: S2f]]
+[[Category: Eisenstein E]]
-[[Category: Structural genomic]]
+[[Category: Gilliland GL]]
-[[Category: Structure 2 function project]]
+[[Category: Ladner JE]]
+[[Category: Tordova M]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:55:09 2009''