1j9a: Difference between revisions

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<StructureSection load='1j9a' size='340' side='right'caption='[[1j9a]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='1j9a' size='340' side='right'caption='[[1j9a]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1j9a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J9A FirstGlance]. <br>
<table><tr><td colspan='2'>[[1j9a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J9A FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j9a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j9a OCA], [http://pdbe.org/1j9a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j9a RCSB], [http://www.ebi.ac.uk/pdbsum/1j9a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1j9a ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j9a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j9a OCA], [https://pdbe.org/1j9a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j9a RCSB], [https://www.ebi.ac.uk/pdbsum/1j9a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j9a ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/ORN_HAEIN ORN_HAEIN]] 3'-to-5' exoribonuclease specific for small oligoribonucleotides (By similarity).  
[https://www.uniprot.org/uniprot/ORN_HAEIN ORN_HAEIN] 3'-to-5' exoribonuclease specific for small oligoribonucleotides (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/1j9a_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/1j9a_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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==See Also==
==See Also==
*[[Ribonuclease|Ribonuclease]]
*[[Exonuclease 3D structures|Exonuclease 3D structures]]
*[[Temp|Temp]]
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacterium influenzae lehmann and neumann 1896]]
[[Category: Haemophilus influenzae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bonander, N]]
[[Category: Bonander N]]
[[Category: Eisenstein, E]]
[[Category: Eisenstein E]]
[[Category: Gilliland, G L]]
[[Category: Gilliland GL]]
[[Category: Ladner, J E]]
[[Category: Ladner JE]]
[[Category: S2F, Structure 2.Function Project]]
[[Category: Tordova M]]
[[Category: Tordova, M]]
[[Category: Exoribonuclease]]
[[Category: Haemophilus influenzae]]
[[Category: Hydrolase]]
[[Category: Oligoribonuclease]]
[[Category: Ribonuclease]]
[[Category: S2f]]
[[Category: Structural genomic]]
[[Category: Structure 2 function project]]

Latest revision as of 09:48, 30 October 2024

OLIGORIBONUCLEASEOLIGORIBONUCLEASE

Structural highlights

1j9a is a 1 chain structure with sequence from Haemophilus influenzae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ORN_HAEIN 3'-to-5' exoribonuclease specific for small oligoribonucleotides (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1j9a, resolution 2.50Å

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