1djp: Difference between revisions

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 ==CRYSTAL STRUCTURE OF PSEUDOMONAS 7A GLUTAMINASE-ASPARAGINASE WITH THE INHIBITOR DON COVALENTLY BOUND IN THE ACTIVE SITE==
-<StructureSection load='1djp' size='340' side='right' caption='[[1djp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='1djp' size='340' side='right'caption='[[1djp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1djp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_7a Pseudomonas 7a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DJP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DJP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1djp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._7A Pseudomonas sp. 7A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DJP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DO2:5,5-DIHYDROXY-6-OXO-L-NORLEUCINE'>DO2</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4pga|4pga]], [[1djo|1djo]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DO2:5,5-DIHYDROXY-6-OXO-L-NORLEUCINE'>DO2</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamin-(asparagin-)ase Glutamin-(asparagin-)ase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.38 3.5.1.38] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1djp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1djp OCA], [https://pdbe.org/1djp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1djp RCSB], [https://www.ebi.ac.uk/pdbsum/1djp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1djp ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1djp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1djp OCA], [http://pdbe.org/1djp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1djp RCSB], [http://www.ebi.ac.uk/pdbsum/1djp PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/ASPQ_PSES7 ASPQ_PSES7]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/1djp_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/1djp_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1djp ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 29: / Line 31: @@
 ==See Also==
-*[[Glutaminase|Glutaminase]]
+*[[Glutaminase 3D structures|Glutaminase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Pseudomonas 7a]]
+[[Category: Large Structures]]
-[[Category: Lacount, M W]]
+[[Category: Pseudomonas sp. 7A]]
-[[Category: Lebioda, L]]
+[[Category: Lacount MW]]
-[[Category: Lewinski, K]]
+[[Category: Lebioda L]]
-[[Category: Ortlund, E]]
+[[Category: Lewinski K]]
-[[Category: 6-diazo-5-oxo-l-norvaline]]
+[[Category: Ortlund E]]
-[[Category: Asparaginase]]
-[[Category: Covalently bound inhibitor]]
-[[Category: Don]]
-[[Category: Glutaminase]]
-[[Category: Glutaminase-asparaginase]]
-[[Category: Hydrolase]]
-[[Category: Pga]]
-[[Category: Suicide inhibitor]]