1aq5: Difference between revisions

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OCA

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 ==HIGH-RESOLUTION SOLUTION NMR STRUCTURE OF THE TRIMERIC COILED-COIL DOMAIN OF CHICKEN CARTILAGE MATRIX PROTEIN, 20 STRUCTURES==
-<StructureSection load='1aq5' size='340' side='right' caption='[[1aq5]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='1aq5' size='340' side='right'caption='[[1aq5]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1aq5]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AQ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1AQ5 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1aq5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AQ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AQ5 FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CMP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 Gallus gallus])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1aq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aq5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1aq5 RCSB], [http://www.ebi.ac.uk/pdbsum/1aq5 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aq5 OCA], [https://pdbe.org/1aq5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aq5 RCSB], [https://www.ebi.ac.uk/pdbsum/1aq5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aq5 ProSAT]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MATN1_CHICK MATN1_CHICK] Cartilage matrix protein is a major component of the extracellular matrix of non-articular cartilage. It binds to collagen.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/1aq5_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/1aq5_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aq5 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 24: / Line 27: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1aq5" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
@@ Line 29: / Line 33: @@
 </StructureSection>
 [[Category: Gallus gallus]]
-[[Category: Alexandrescu, A T.]]
+[[Category: Large Structures]]
-[[Category: Dames, S A.]]
+[[Category: Alexandrescu AT]]
-[[Category: Engel, J.]]
+[[Category: Dames SA]]
-[[Category: Kammerer, R A.]]
+[[Category: Engel J]]
-[[Category: Wiltscheck, R.]]
+[[Category: Kammerer RA]]
-[[Category: Cartilage matrix protein]]
+[[Category: Wiltscheck R]]
-[[Category: Coiled-coil]]
-[[Category: Heptad repeat]]
-[[Category: Interchain disulfide bond]]
-[[Category: Matrilin-1]]
-[[Category: Noncollagenous extracellular protein]]
-[[Category: Oligomerization domain]]
-[[Category: Trimer]]