2uzx: Difference between revisions

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-{{Seed}}
-[[Image:2uzx.png|left|200px]]
-<!--
+==Structure of the human receptor tyrosine kinase Met in complex with the Listeria monocytogenes invasion protein InlB: Crystal form I==
-The line below this paragraph, containing "STRUCTURE_2uzx", creates the "Structure Box" on the page.
+<StructureSection load='2uzx' size='340' side='right'caption='[[2uzx]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2uzx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UZX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UZX FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uzx OCA], [https://pdbe.org/2uzx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uzx RCSB], [https://www.ebi.ac.uk/pdbsum/2uzx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uzx ProSAT]</span></td></tr>
-{{STRUCTURE_2uzx|  PDB=2uzx  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/INLB_LISMO INLB_LISMO] Mediates the entry of Listeria monocytogenes into cells.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uz/2uzx_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uzx ConSurf].
+<div style="clear:both"></div>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+The tyrosine kinase Met, the product of the c-met proto-oncogene and the receptor for hepatocyte growth factor/scatter factor (HGF/SF), mediates signals critical for cell survival and migration. The human pathogen Listeria monocytogenes exploits Met signaling for invasion of host cells via its surface protein InlB. We present the crystal structure of the complex between a large fragment of the human Met ectodomain and the Met-binding domain of InlB. The concave face of the InlB leucine-rich repeat region interacts tightly with the first immunoglobulin-like domain of the Met stalk, a domain which does not bind HGF/SF. A second contact between InlB and the Met Sema domain locks the otherwise flexible receptor in a rigid, signaling competent conformation. Full Met activation requires the additional C-terminal domains of InlB which induce heparin-mediated receptor clustering and potent signaling. Thus, although it elicits a similar cellular response, InlB is not a structural mimic of HGF/SF.
-===STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: CRYSTAL FORM I===
+Structure of the human receptor tyrosine kinase met in complex with the Listeria invasion protein InlB.,Niemann HH, Jager V, Butler PJ, van den Heuvel J, Schmidt S, Ferraris D, Gherardi E, Heinz DW Cell. 2007 Jul 27;130(2):235-46. PMID:17662939<ref>PMID:17662939</ref>
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
+<div class="pdbe-citations 2uzx" style="background-color:#fffaf0;"></div>
-<!--
+==See Also==
-The line below this paragraph, {{ABSTRACT_PUBMED_17662939}}, adds the Publication Abstract to the page
+*[[Hepatocyte growth factor receptor 3D structures|Hepatocyte growth factor receptor 3D structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 17662939 is the PubMed ID number.
+== References ==
--->
+<references/>
-{{ABSTRACT_PUBMED_17662939}}
+__TOC__
+</StructureSection>
-==About this Structure==
-UZX is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UZX OCA].
-==Reference==
-<ref group="xtra">PMID:17662939</ref><references group="xtra"/>
 [[Category: Homo sapiens]]
-[[Category: Listeria monocytogenes]]
+[[Category: Large Structures]]
-[[Category: Butler, P J.G.]]
+[[Category: Listeria monocytogenes EGD-e]]
-[[Category: Ferraris, D.]]
+[[Category: Butler PJG]]
-[[Category: Gherardi, E.]]
+[[Category: Ferraris D]]
-[[Category: Heinz, D W.]]
+[[Category: Gherardi E]]
-[[Category: Heuvel, J Van Den.]]
+[[Category: Heinz DW]]
-[[Category: Jager, V.]]
+[[Category: Jager V]]
-[[Category: Niemann, H H.]]
+[[Category: Niemann HH]]
-[[Category: Schmidt, S.]]
+[[Category: Schmidt S]]
-[[Category: Alternative splicing]]
+[[Category: Van Den Heuvel J]]
-[[Category: Atp-binding]]
-[[Category: Chromosomal rearrangement]]
-[[Category: Disease mutation]]
-[[Category: Glycoprotein]]
-[[Category: Hepatocyte growth factor receptor]]
-[[Category: Hgfr]]
-[[Category: Internalin]]
-[[Category: Kinase]]
-[[Category: Leucine rich repeat]]
-[[Category: Leucine-rich repeat]]
-[[Category: Lrr]]
-[[Category: Membrane]]
-[[Category: Nucleotide-binding]]
-[[Category: Phosphorylation]]
-[[Category: Polymorphism]]
-[[Category: Proto-oncogene]]
-[[Category: Receptor]]
-[[Category: Receptor ectodomain]]
-[[Category: Signaling protein]]
-[[Category: Signaling protein/receptor complex]]
-[[Category: Transferase]]
-[[Category: Transmembrane]]
-[[Category: Tyrosine-protein kinase]]
-[[Category: Virulence factor]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:00:18 2009''