2oaz: Difference between revisions
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<StructureSection load='2oaz' size='340' side='right'caption='[[2oaz]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='2oaz' size='340' side='right'caption='[[2oaz]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2oaz]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2oaz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OAZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OAZ FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=I96:N-(2-ISOPROPYLPHENYL)-3-[(2-THIENYLMETHYL)THIO]-1H-1,2,4-TRIAZOL-5-AMINE'>I96</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=I96:N-(2-ISOPROPYLPHENYL)-3-[(2-THIENYLMETHYL)THIO]-1H-1,2,4-TRIAZOL-5-AMINE'>I96</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oaz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oaz OCA], [https://pdbe.org/2oaz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oaz RCSB], [https://www.ebi.ac.uk/pdbsum/2oaz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oaz ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/MAP2_HUMAN MAP2_HUMAN] Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). The catalytic activity of human METAP2 toward Met-Val peptides is consistently two orders of magnitude higher than that of METAP1, suggesting that it is responsible for processing proteins containing N-terminal Met-Val and Met-Thr sequences in vivo. Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oaz_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oaz_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Fisher PW]] | |||
[[Category: Fisher | [[Category: Hofmann GA]] | ||
[[Category: Hofmann | [[Category: Janson CA]] | ||
[[Category: Janson | [[Category: Johnson RK]] | ||
[[Category: Johnson | [[Category: Kirkpatrick R]] | ||
[[Category: Kirkpatrick | [[Category: Ma C]] | ||
[[Category: Ma | [[Category: Marino Jr JP]] | ||
[[Category: Marino | [[Category: Mattern M]] | ||
[[Category: Mattern | [[Category: Meek TD]] | ||
[[Category: Meek | [[Category: Ryan D]] | ||
[[Category: Ryan | [[Category: Schulz C]] | ||
[[Category: Schulz | [[Category: Smith WW]] | ||
[[Category: Smith | [[Category: Tew DG]] | ||
[[Category: Tew | [[Category: Thompson SK]] | ||
[[Category: Thompson | [[Category: Tomazek Jr TA]] | ||
[[Category: Tomazek | [[Category: Veber DF]] | ||
[[Category: Veber | [[Category: Xiong WC]] | ||
[[Category: Xiong | [[Category: Yamamoto Y]] | ||
[[Category: Yamamoto | [[Category: Yamashita K]] | ||
[[Category: Yamashita | [[Category: Yang G]] | ||
[[Category: Yang | |||