2ajl: Difference between revisions

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{{Seed}}
[[Image:2ajl.png|left|200px]]


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==X-ray Structure of Novel Biaryl-Based Dipeptidyl peptidase IV inhibitor==
The line below this paragraph, containing "STRUCTURE_2ajl", creates the "Structure Box" on the page.
<StructureSection load='2ajl' size='340' side='right'caption='[[2ajl]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AJL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=JNH:1-[2-(S)-AMINO-3-BIPHENYL-4-YL-PROPIONYL]-PYRROLIDINE-2-(S)-CARBONITRILE'>JNH</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
{{STRUCTURE_2ajl|  PDB=2ajl  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ajl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ajl OCA], [https://pdbe.org/2ajl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ajl RCSB], [https://www.ebi.ac.uk/pdbsum/2ajl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ajl ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aj/2ajl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ajl ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The discovery, SAR, and X-ray crystal structure of novel biarylaminoacyl-(S)-2-cyano-pyrrolidines and biarylaminoacylthiazolidines as potent inhibitors of dipeptidyl peptidase IV (DPP IV) are reported.


===X-ray Structure of Novel Biaryl-Based Dipeptidyl peptidase IV inhibitor===
Discovery, SAR, and X-ray structure of novel biaryl-based dipeptidyl peptidase IV inhibitors.,Qiao L, Baumann CA, Crysler CS, Ninan NS, Abad MC, Spurlino JC, Desjarlais RL, Kervinen J, Neeper MP, Bayoumy SS, Williams R, Deckman IC, Dasgupta M, Reed RL, Huebert ND, Tomczuk BE, Moriarty KJ Bioorg Med Chem Lett. 2006 Jan 1;16(1):123-8. Epub 2005 Oct 19. PMID:16236500<ref>PMID:16236500</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 2ajl" style="background-color:#fffaf0;"></div>


<!--
==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_16236500}}, adds the Publication Abstract to the page
*[[Dipeptidyl peptidase 3D structures|Dipeptidyl peptidase 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 16236500 is the PubMed ID number.
== References ==
-->
<references/>
{{ABSTRACT_PUBMED_16236500}}
__TOC__
 
</StructureSection>
==About this Structure==
[[Category: Large Structures]]
2AJL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AJL OCA].
[[Category: Abad MC]]
 
[[Category: Baumann CA]]
==Reference==
[[Category: Bayoumy SS]]
<ref group="xtra">PMID:16236500</ref><references group="xtra"/>
[[Category: Crysler CS]]
[[Category: Dipeptidyl-peptidase IV]]
[[Category: DesJarlais RL]]
[[Category: Homo sapiens]]
[[Category: Kervinen J]]
[[Category: Abad, M C.]]
[[Category: Neeper MP]]
[[Category: Baumann, C A.]]
[[Category: Ninan NS]]
[[Category: Bayoumy, S S.]]
[[Category: Qiao L]]
[[Category: Crysler, C S.]]
[[Category: Spurlino JC]]
[[Category: DesJarlais, R L.]]
[[Category: Kervinen, J.]]
[[Category: Neeper, M P.]]
[[Category: Ninan, N S.]]
[[Category: Qiao, L.]]
[[Category: Spurlino, J C.]]
[[Category: Aminopeptidase]]
[[Category: Hydrolase]]
[[Category: Protease]]
[[Category: Serine protease]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:50:40 2009''

Latest revision as of 12:44, 25 December 2024

X-ray Structure of Novel Biaryl-Based Dipeptidyl peptidase IV inhibitorX-ray Structure of Novel Biaryl-Based Dipeptidyl peptidase IV inhibitor

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The discovery, SAR, and X-ray crystal structure of novel biarylaminoacyl-(S)-2-cyano-pyrrolidines and biarylaminoacylthiazolidines as potent inhibitors of dipeptidyl peptidase IV (DPP IV) are reported.

Discovery, SAR, and X-ray structure of novel biaryl-based dipeptidyl peptidase IV inhibitors.,Qiao L, Baumann CA, Crysler CS, Ninan NS, Abad MC, Spurlino JC, Desjarlais RL, Kervinen J, Neeper MP, Bayoumy SS, Williams R, Deckman IC, Dasgupta M, Reed RL, Huebert ND, Tomczuk BE, Moriarty KJ Bioorg Med Chem Lett. 2006 Jan 1;16(1):123-8. Epub 2005 Oct 19. PMID:16236500[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. ↑ Qiao L, Baumann CA, Crysler CS, Ninan NS, Abad MC, Spurlino JC, Desjarlais RL, Kervinen J, Neeper MP, Bayoumy SS, Williams R, Deckman IC, Dasgupta M, Reed RL, Huebert ND, Tomczuk BE, Moriarty KJ. Discovery, SAR, and X-ray structure of novel biaryl-based dipeptidyl peptidase IV inhibitors. Bioorg Med Chem Lett. 2006 Jan 1;16(1):123-8. Epub 2005 Oct 19. PMID:16236500 doi:10.1016/j.bmcl.2005.09.037

2ajl, resolution 2.50Å

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