1zrk: Difference between revisions

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-[[Image:1zrk.png|left|200px]]
-{{STRUCTURE_1zrk|  PDB=1zrk  |  SCENE=  }}
+==Factor XI complexed with 3-hydroxypropyl 3-(7-amidinonaphthalene-1-carboxamido)benzenesulfonate==
+<StructureSection load='1zrk' size='340' side='right'caption='[[1zrk]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-===Factor XI complexed with 3-hydroxypropyl 3-(7-amidinonaphthalene-1-carboxamido)benzenesulfonate===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1zrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZRK FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=367:3-HYDROXYPROPYL+3-[({7-[AMINO(IMINO)METHYL]-1-NAPHTHYL}AMINO)CARBONYL]BENZENESULFONATE'>367</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[1zrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZRK OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zrk OCA], [https://pdbe.org/1zrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zrk RCSB], [https://www.ebi.ac.uk/pdbsum/1zrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zrk ProSAT]</span></td></tr>
+</table>
+== Disease ==
+[https://www.uniprot.org/uniprot/FA11_HUMAN FA11_HUMAN] Defects in F11 are the cause of factor XI deficiency (FA11D) [MIM:[https://omim.org/entry/612416 612416]; also known as plasma thromboplastin antecedent deficiency or Rosenthal syndrome. It is a hemorrhagic disease characterized by reduced levels and activity of factor XI resulting in moderate bleeding symptoms, usually occurring after trauma or surgery. Patients usually do not present spontaneous bleeding but women can present with menorrhagia. Hemorrhages are usually moderate.<ref>PMID:2813350</ref> <ref>PMID:1547342</ref> <ref>PMID:7888672</ref> <ref>PMID:7669672</ref> <ref>PMID:9401068</ref> <ref>PMID:9787168</ref> <ref>PMID:10027710</ref> <ref>PMID:10606881</ref> <ref>PMID:11895778</ref> <ref>PMID:15026311</ref> <ref>PMID:15180874</ref> <ref>PMID:15953011</ref> <ref>PMID:16607084</ref> <ref>PMID:18005151</ref> <ref>PMID:21668437</ref> <ref>PMID:21457405</ref> <ref>PMID:22016685</ref> <ref>PMID:22322133</ref> <ref>PMID:21999818</ref> <ref>PMID:22159456</ref>
+== Function ==
+[https://www.uniprot.org/uniprot/FA11_HUMAN FA11_HUMAN] Factor XI triggers the middle phase of the intrinsic pathway of blood coagulation by activating factor IX.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zr/1zrk_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zrk ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Factor XIa|Factor XIa]]
+*[[Factor XIa 3D structures|Factor XIa 3D structures]]
-[[Category: Coagulation factor XIa]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Babine, R.]]
+[[Category: Large Structures]]
-[[Category: Bannister, T.]]
+[[Category: Babine R]]
-[[Category: Bibbins, F.]]
+[[Category: Bannister T]]
-[[Category: Gorga, J.]]
+[[Category: Bibbins F]]
-[[Category: Guo, Z.]]
+[[Category: Gorga J]]
-[[Category: Jin, L.]]
+[[Category: Guo Z]]
-[[Category: Magee, S.]]
+[[Category: Jin L]]
-[[Category: Noll, R.]]
+[[Category: Magee S]]
-[[Category: Rynkiewicz, M J.]]
+[[Category: Noll R]]
-[[Category: Strickler, J.]]
+[[Category: Rynkiewicz MJ]]
-[[Category: Coagulation]]
+[[Category: Strickler J]]
-[[Category: Hydrolase]]
-[[Category: Serine protease]]