2hc0: Difference between revisions

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New page: left|200px<br /> <applet load="2hc0" size="450" color="white" frame="true" align="right" spinBox="true" caption="2hc0, resolution 1.3Å" /> '''Structure of HIV pro...
 
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[[Image:2hc0.gif|left|200px]]<br />
<applet load="2hc0" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2hc0, resolution 1.3&Aring;" />
'''Structure of HIV protease 6X mutant in complex with AB-2.'''<br />


==About this Structure==
==Structure of HIV protease 6X mutant in complex with AB-2.==
2HC0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1] with BR and AB2 as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/HIV-1_retropepsin HIV-1 retropepsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.16 3.4.23.16] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2HC0 OCA].  
<StructureSection load='2hc0' size='340' side='right'caption='[[2hc0]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
[[Category: HIV-1 retropepsin]]
== Structural highlights ==
<table><tr><td colspan='2'>[[2hc0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HC0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HC0 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AB2:[1-((1S,2R)-1-BENZYL-2-HYDROXY-3-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}PROPYL)-1H-1,2,3-TRIAZOL-4-YL]METHYL+(1R,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YLCARBAMATE'>AB2</scene>, <scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hc0 OCA], [https://pdbe.org/2hc0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hc0 RCSB], [https://www.ebi.ac.uk/pdbsum/2hc0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hc0 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9E3M8_HV1 Q9E3M8_HV1]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hc/2hc0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hc0 ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Immunodeficiency virus protease 3D structures|Immunodeficiency virus protease 3D structures]]
__TOC__
</StructureSection>
[[Category: Human immunodeficiency virus 1]]
[[Category: Human immunodeficiency virus 1]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Brik, A.]]
[[Category: Brik A]]
[[Category: Elder, J.H.]]
[[Category: Elder JH]]
[[Category: Heaslet, H.]]
[[Category: Heaslet H]]
[[Category: Lin, Y.C.]]
[[Category: Lin Y-C]]
[[Category: Stout, C.D.]]
[[Category: Stout CD]]
[[Category: AB2]]
[[Category: BR]]
[[Category: aspartyl]]
[[Category: hiv]]
[[Category: mutant]]
[[Category: protease]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Thu Nov  8 14:49:58 2007''

Latest revision as of 12:45, 25 December 2024

Structure of HIV protease 6X mutant in complex with AB-2.Structure of HIV protease 6X mutant in complex with AB-2.

Structural highlights

2hc0 is a 2 chain structure with sequence from Human immunodeficiency virus 1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9E3M8_HV1

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2hc0, resolution 1.30Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA