3a8d: Difference between revisions

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-{{Seed}}
-[[Image:3a8d.jpg|left|200px]]
-<!--
+==Crystal Structure of Trypsin complexed with (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid (under aniline-free condition)==
-The line below this paragraph, containing "STRUCTURE_3a8d", creates the "Structure Box" on the page.
+<StructureSection load='3a8d' size='340' side='right'caption='[[3a8d]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3a8d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A8D FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=O09:(E)-2-(4-CARBAMIMIDOYLBENZYLIDENEAMINOOXY)ACETIC+ACID'>O09</scene></td></tr>
-{{STRUCTURE_3a8d|  PDB=3a8d  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a8d OCA], [https://pdbe.org/3a8d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a8d RCSB], [https://www.ebi.ac.uk/pdbsum/3a8d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a8d ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a8/3a8d_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a8d ConSurf].
+<div style="clear:both"></div>
-===Crystal Structure of Trypsin complexed with (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid (under aniline-free condition)===
+==See Also==
+*[[Trypsin 3D structures|Trypsin 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-A8D is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8D OCA].
 [[Category: Bos taurus]]
-[[Category: Trypsin]]
+[[Category: Large Structures]]
-[[Category: Tanaka, I.]]
+[[Category: Tanaka I]]
-[[Category: Yamane, J.]]
+[[Category: Yamane J]]
-[[Category: Yao, M.]]
+[[Category: Yao M]]
-[[Category: Disulfide bond]]
-[[Category: Hydrolase]]
-[[Category: In-crystal chemical ligation]]
-[[Category: Metal-binding]]
-[[Category: Protease]]
-[[Category: Secreted]]
-[[Category: Serine protease]]
-[[Category: Zymogen]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 29 08:12:21 2010''