2pih: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pih.jpg|left|200px]]


<!--
==Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375==
The line below this paragraph, containing "STRUCTURE_2pih", creates the "Structure Box" on the page.
<StructureSection load='2pih' size='340' side='right'caption='[[2pih]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pih]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PIH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2pih|  PDB=2pih  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pih OCA], [https://pdbe.org/2pih PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pih RCSB], [https://www.ebi.ac.uk/pdbsum/2pih PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pih ProSAT], [https://www.topsan.org/Proteins/NESGC/2pih TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375'''
== Function ==
 
[https://www.uniprot.org/uniprot/YMCA_BACSU YMCA_BACSU] May work together with YlbF to regulate community development.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2PIH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIH OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/2pih_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pih ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Abashidze, M.]]
[[Category: Abashidze M]]
[[Category: Acton, T B.]]
[[Category: Acton TB]]
[[Category: Baran, M C.]]
[[Category: Baran MC]]
[[Category: Cunningham, K.]]
[[Category: Cunningham K]]
[[Category: Fang, Y.]]
[[Category: Fang Y]]
[[Category: Forouhar, F.]]
[[Category: Forouhar F]]
[[Category: Hunt, J F.]]
[[Category: Hunt JF]]
[[Category: Liu, J.]]
[[Category: Liu J]]
[[Category: Ma, L-C.]]
[[Category: Ma L-C]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Rost B]]
[[Category: Rost, B.]]
[[Category: Seetharaman J]]
[[Category: Seetharaman, J.]]
[[Category: Tong L]]
[[Category: Tong, L.]]
[[Category: Wang D]]
[[Category: Wang, D.]]
[[Category: Xia R]]
[[Category: Xia, R.]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Regulate community development]]
[[Category: Structural genomic]]
[[Category: Ymca]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 13:10:27 2008''

Latest revision as of 08:25, 17 October 2024

Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375

Structural highlights

2pih is a 2 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YMCA_BACSU May work together with YlbF to regulate community development.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pih, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2pih&oldid=4192158"