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[[Image:2o1m.jpg|left|200px]]<br /><applet load="2o1m" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2o1m, resolution 2.00&Aring;" />
'''Crystal structure of the probable amino-acid ABC transporter extracellular-binding protein ytmK from Bacillus subtilis. Northeast Structural Genomics Consortium target SR572'''<br />


==About this Structure==
==Crystal structure of the probable amino-acid ABC transporter extracellular-binding protein ytmK from Bacillus subtilis. Northeast Structural Genomics Consortium target SR572==
2O1M is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1M OCA].  
<StructureSection load='2o1m' size='340' side='right'caption='[[2o1m]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2o1m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O1M FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o1m OCA], [https://pdbe.org/2o1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o1m RCSB], [https://www.ebi.ac.uk/pdbsum/2o1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o1m ProSAT], [https://www.topsan.org/Proteins/NESGC/2o1m TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TCYK_BACSU TCYK_BACSU] Part of the ABC transporter complex TcyJKLMN involved in L-cystine import. Is also involved in cystathionine, djenkolate, and S-methylcysteine transport.<ref>PMID:15262924</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/2o1m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o1m ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Acton, T B.]]
[[Category: Acton TB]]
[[Category: Baran, M C.]]
[[Category: Baran MC]]
[[Category: Chen, C X.]]
[[Category: Chen CX]]
[[Category: Cunningham, K.]]
[[Category: Cunningham K]]
[[Category: Fang, Y.]]
[[Category: Fang Y]]
[[Category: Hunt, J F.]]
[[Category: Hunt JF]]
[[Category: Kuzin, A P.]]
[[Category: Kuzin AP]]
[[Category: Liu, J.]]
[[Category: Liu J]]
[[Category: Ma, L C.]]
[[Category: Ma LC]]
[[Category: Montelione, G.]]
[[Category: Montelione G]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Rost B]]
[[Category: Rost, B.]]
[[Category: Seetharaman J]]
[[Category: Seetharaman, J.]]
[[Category: Su M]]
[[Category: Su, M.]]
[[Category: Tong L]]
[[Category: Tong, L.]]
[[Category: Xiao R]]
[[Category: Xiao, R.]]
[[Category: SO4]]
[[Category: nesg]]
[[Category: nesg x-ray o34852 ytmk_bacsu]]
[[Category: northeast structural genomics consortium]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomics]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:13:24 2008''

Latest revision as of 08:23, 17 October 2024

Crystal structure of the probable amino-acid ABC transporter extracellular-binding protein ytmK from Bacillus subtilis. Northeast Structural Genomics Consortium target SR572Crystal structure of the probable amino-acid ABC transporter extracellular-binding protein ytmK from Bacillus subtilis. Northeast Structural Genomics Consortium target SR572

Structural highlights

2o1m is a 2 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

TCYK_BACSU Part of the ABC transporter complex TcyJKLMN involved in L-cystine import. Is also involved in cystathionine, djenkolate, and S-methylcysteine transport.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Burguiere P, Auger S, Hullo MF, Danchin A, Martin-Verstraete I. Three different systems participate in L-cystine uptake in Bacillus subtilis. J Bacteriol. 2004 Aug;186(15):4875-84. PMID:15262924 doi:http://dx.doi.org/10.1128/JB.186.15.4875-4884.2004

2o1m, resolution 2.00Å

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