1z0x: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1z0x.gif|left|200px]]
- {{Structure
+==Crystal structure of transcriptional regulator, tetR Family from Enterococcus faecalis V583==
-|PDB= 1z0x |SIZE=350|CAPTION= <scene name='initialview01'>1z0x</scene>, resolution 2.4&Aring;
+<StructureSection load='1z0x' size='340' side='right'caption='[[1z0x]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+<table><tr><td colspan='2'>[[1z0x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z0X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z0X FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-|GENE= EF0787 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 Enterococcus faecalis V583])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00440 TetR_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1309 AcrR]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z0x OCA], [https://pdbe.org/1z0x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z0x RCSB], [https://www.ebi.ac.uk/pdbsum/1z0x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z0x ProSAT], [https://www.topsan.org/Proteins/MCSG/1z0x TOPSAN]</span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z0x OCA], [http://www.ebi.ac.uk/pdbsum/1z0x PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1z0x RCSB]</span>
+</table>
-}}
+== Function ==
+[https://www.uniprot.org/uniprot/Q837P6_ENTFA Q837P6_ENTFA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z0/1z0x_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z0x ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of transcriptional regulator, tetR Family from Enterococcus faecalis V583'''
+==See Also==
+*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
+*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-==About this Structure==
+__TOC__
-Z0X is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis_v583 Enterococcus faecalis v583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z0X OCA].
+</StructureSection>
-[[Category: Enterococcus faecalis v583]]
+[[Category: Enterococcus faecalis V583]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Chang, C.]]
+[[Category: Chang C]]
-[[Category: Collart, F.]]
+[[Category: Collart F]]
-[[Category: Joachimiak, A.]]
+[[Category: Joachimiak A]]
-[[Category: Li, H.]]
+[[Category: Li H]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
-[[Category: mcsg]]
-[[Category: midwest center for structural genomic]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: structural genomic]]
-[[Category: tetr]]
-[[Category: transcriptional regulator]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:17:07 2008''