1xq5: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1xq5.jpg|left|200px]]<br /><applet load="1xq5" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1xq5, resolution 1.90&Aring;" />
'''Met-Perch Hemoglobin at 1.9A'''<br />


==About this Structure==
==Met-Perch Hemoglobin at 1.9A==
1XQ5 is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Perca_flavescens Perca flavescens] with <scene name='pdbligand=ACE:'>ACE</scene> and <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Ace+Binding+Site+For+Residue+A+0'>AC1</scene>, <scene name='pdbsite=AC2:Ace+Binding+Site+For+Residue+C+0'>AC2</scene>, <scene name='pdbsite=AC3:Hem+Binding+Site+For+Residue+A+143'>AC3</scene>, <scene name='pdbsite=AC4:Hem+Binding+Site+For+Residue+B+148'>AC4</scene>, <scene name='pdbsite=AC5:Hem+Binding+Site+For+Residue+C+143'>AC5</scene> and <scene name='pdbsite=AC6:Hem+Binding+Site+For+Residue+D+148'>AC6</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XQ5 OCA].  
<StructureSection load='1xq5' size='340' side='right'caption='[[1xq5]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1xq5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Perca_flavescens Perca flavescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XQ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XQ5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xq5 OCA], [https://pdbe.org/1xq5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xq5 RCSB], [https://www.ebi.ac.uk/pdbsum/1xq5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xq5 ProSAT], [https://www.topsan.org/Proteins/CESG/1xq5 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D0VWV2_PERFV D0VWV2_PERFV]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xq/1xq5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xq5 ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Perca flavescens]]
[[Category: Perca flavescens]]
[[Category: Protein complex]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: ACE]]
[[Category: HEM]]
[[Category: center for eukaryotic structural genomics]]
[[Category: cesg]]
[[Category: fish hemoglobin]]
[[Category: oxygen storage/transport complex]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: rapid oxidation]]
[[Category: structural genomics]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:57:30 2008''

Latest revision as of 08:01, 17 October 2024

Met-Perch Hemoglobin at 1.9AMet-Perch Hemoglobin at 1.9A

Structural highlights

1xq5 is a 4 chain structure with sequence from Perca flavescens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

D0VWV2_PERFV

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1xq5, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1xq5&oldid=4191387"