1vlm: Difference between revisions

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-[[Image:1vlm.png|left|200px]]
-{{STRUCTURE_1vlm|  PDB=1vlm  |  SCENE=  }}
+==Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution==
+<StructureSection load='1vlm' size='340' side='right'caption='[[1vlm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-===Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1vlm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VLM FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-[[1vlm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VLM OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vlm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vlm OCA], [https://pdbe.org/1vlm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vlm RCSB], [https://www.ebi.ac.uk/pdbsum/1vlm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vlm ProSAT], [https://www.topsan.org/Proteins/JCSG/1vlm TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9X119_THEMA Q9X119_THEMA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/1vlm_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vlm ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[SAM-dependent methyltransferase|SAM-dependent methyltransferase]]
+*[[SAM-dependent methyltrasferase 3D structures|SAM-dependent methyltrasferase 3D structures]]
-[[Category: Thermotoga maritima]]
+__TOC__
-[[Category: JCSG, Joint Center for Structural Genomics.]]
+</StructureSection>
-[[Category: Jcsg]]
+[[Category: Large Structures]]
-[[Category: Joint center for structural genomic]]
+[[Category: Thermotoga maritima MSB8]]
-[[Category: Possible histamine n-methyltransferase]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Sam-dependent methyltransferase]]
-[[Category: Structural genomic]]
-[[Category: Tm1293]]
-[[Category: Transferase]]