1sh7: Difference between revisions

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OCA

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 ==Crystal structure of a cold adapted subtilisin-like serine proteinase==
-<StructureSection load='1sh7' size='340' side='right' caption='[[1sh7]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
+<StructureSection load='1sh7' size='340' side='right'caption='[[1sh7]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1sh7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_sp._pa-44 Vibrio sp. pa-44]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SH7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1SH7 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1sh7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_sp._PA-44 Vibrio sp. PA-44]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SH7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SH7 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1s2n|1s2n]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1sh7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sh7 OCA], [http://pdbe.org/1sh7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1sh7 RCSB], [http://www.ebi.ac.uk/pdbsum/1sh7 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sh7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sh7 OCA], [https://pdbe.org/1sh7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sh7 RCSB], [https://www.ebi.ac.uk/pdbsum/1sh7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sh7 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q8GB52_9VIBR Q8GB52_9VIBR]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sh/1sh7_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sh/1sh7_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sh7 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 28: / Line 31: @@
 ==See Also==
-*[[Proteinase|Proteinase]]
+*[[Proteinase 3D structures|Proteinase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Vibrio sp. pa-44]]
+[[Category: Large Structures]]
-[[Category: Arnorsdottir, J]]
+[[Category: Vibrio sp. PA-44]]
-[[Category: Ficner, R]]
+[[Category: Arnorsdottir J]]
-[[Category: Kristjansson, M M]]
+[[Category: Ficner R]]
-[[Category: Calcium depentent]]
+[[Category: Kristjansson MM]]
-[[Category: Cold adaptation]]
-[[Category: Hydrolase]]
-[[Category: Psychrotrophic]]
-[[Category: Subtilisin-like proteinase]]