1osd: Difference between revisions

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OCA

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 ==crystal structure of Oxidized MerP from Ralstonia metallidurans CH34==
-<StructureSection load='1osd' size='340' side='right' caption='[[1osd]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='1osd' size='340' side='right'caption='[[1osd]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1osd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupriavidus_metallidurans Cupriavidus metallidurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OSD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OSD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1osd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_metallidurans Cupriavidus metallidurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OSD FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2hqi|2hqi]], [[1afi|1afi]], [[1afj|1afj]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MerP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119219 Cupriavidus metallidurans])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1osd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1osd OCA], [https://pdbe.org/1osd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1osd RCSB], [https://www.ebi.ac.uk/pdbsum/1osd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1osd ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1osd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1osd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1osd RCSB], [http://www.ebi.ac.uk/pdbsum/1osd PDBsum]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
@@ Line 11: / Line 11: @@
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/os/1osd_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/os/1osd_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1osd ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 25: / Line 25: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1osd" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
@@ Line 30: / Line 31: @@
 </StructureSection>
 [[Category: Cupriavidus metallidurans]]
-[[Category: Cohen-Addad, C]]
+[[Category: Large Structures]]
-[[Category: Coves, J]]
+[[Category: Cohen-Addad C]]
-[[Category: Pebay-Peyroula, E]]
+[[Category: Coves J]]
-[[Category: Rossy, E]]
+[[Category: Pebay-Peyroula E]]
-[[Category: Serre, L]]
+[[Category: Rossy E]]
-[[Category: Mercury resistance]]
+[[Category: Serre L]]
-[[Category: Metal binding protein]]
-[[Category: Perisplasm]]
-[[Category: Structural genomic]]